Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1256 ATGGATGATGGGGAAATCTCGAATGGCTTTCCTCACAACCTAACTGATCATACATCTGATAATCCTCCTGTCTTGAAGAGGAAGAGAAACCTCCCAGGAAACCCAGGCAAGCAAGCTTATCCTGAAGCCGAAGTGATAGCCTTATCGCCAAAGACTCTGATGGCTACCAACAGATTCTTGTGTGAAATTTGTGGGAAGGGTTTCCAAAGGGATCAAAATCTTCAACTCCATCGACGGGGACATAATCTTCCTTGGAAGCTGAAGCAGAGGACAAGCAAAGAACCTAGGAAGCGAGTTTATGTGTGCCCAGAAAAGACTTGCGTCCACCACCACCCTTCAAGGGCTCTGGGAGACTTAACTGGGATAAAGAAGCACTTTTGCAGAAAGCACGGGGAGAAGAAATGGAAGTGCGACAAGTGCTTAAAGCGTTATGCTGTTCAGTCAGACTGGAAAGCCCACTCAAAGGCCTGTGGCACCAGAGAATACAAATGTGATTGTGGGACTATCTTTTCACGGAGAGATAGTTTTATCACTCATCGGGCCTTCTGCGATGCCTTAGCAGAAGAAACAGCCAGGGTAAATGCAACATCCACAATGAGCAACTCCTTTGGGGCCAGCTTCAGTTACAACATCATGGGAACTTCCCAAGGGCCTACCATAGCCTCACATTTTCCTTCAATTTTCAAGCCAATCTCAAGCAATGCTGAAACAAATCATCAAACATCTAGGGGACTATTTCTATGGATGGGTCAAGGACCTCAAGTTCACGAGACAATGGCTAACAATGATTTTCTTGAGATTCATCAACTTGGTTCAGCCACTAGCTCAGGAACAAAATATGGGAACCCACTTGTTTCATGCTCAAATCCTCCACCATCAAATTTTCAGCTAAATTGGATGTTTGGAAATAAGCTTCCCTTCAATGGAAGTCAAGAACTAATTAAAAGCACATCACATCCACTAAGCAGTACCATTAAGGACGCTGGAAGCAGCCAGCTGATTAGCGTTCCTTCCTTGTATAGCTCCCAACATCATCAATCCCATCTAACATCTTCAGCAAATATGTCGGCCACAGCTTTGCTACAAAAAGCTACTCAAATCGGGGCAAGTTCAACTGACCCATCATTCTTAGGGACTTTAGGGTTGAAATGCAGTAACAGTGGAGGTCAAGATGGGAACAAATTTTGCAGAATGTATGGTTCAAGTTCAGTAGTCATGACTAGCCTTGCAAGTGAGACAGAGAACTCAGCAGGTGAATTCTCGCAATTGCACCCTGCAAAAAGCCGTCATGTACAGAATGAAGAGAGTGCAGGGGAGGAAACTAGGGATTTTCTTGGTGTTGGTGGAGGGGTTGTGGAGCAGTGGTGGGGGCAAAGCAAAGGGCAGCTTTTGGACTCCATTATTGCACAGTTTTCATCTCTATTGTGGTTGTTGTCTTGTCAAACTTAG 1449 0.4493 MDDGEISNGFPHNLTDHTSDNPPVLKRKRNLPGNPGKQAYPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEPRKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCDKCLKRYAVQSDWKAHSKACGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVNATSTMSNSFGASFSYNIMGTSQGPTIASHFPSIFKPISSNAETNHQTSRGLFLWMGQGPQVHETMANNDFLEIHQLGSATSSGTKYGNPLVSCSNPPPSNFQLNWMFGNKLPFNGSQELIKSTSHPLSSTIKDAGSSQLISVPSLYSSQHHQSHLTSSANMSATALLQKATQIGASSTDPSFLGTLGLKCSNSGGQDGNKFCRMYGSSSVVMTSLASETENSAGEFSQLHPAKSRHVQNEESAGEETRDFLGVGGGVVEQWWGQSKGQLLDSIIAQFSSLLWLLSCQT 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1256 482 MobiDBLite consensus disorder prediction 1 38 - -
Glsi14g1256 482 MobiDBLite consensus disorder prediction 419 439 - -
Glsi14g1256 482 FunFam protein indeterminate-domain 12-like 38 106 - -
Glsi14g1256 482 FunFam protein indeterminate-domain 5, chloroplastic-like 113 192 - -
Glsi14g1256 482 Gene3D Classic Zinc Finger 55 82 - -
Glsi14g1256 482 ProSiteProfiles Zinc finger C2H2 type domain profile. 59 81 IPR013087 -
Glsi14g1256 482 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 22 457 IPR031140 -
Glsi14g1256 482 ProSitePatterns Zinc finger C2H2 type domain signature. 61 81 IPR013087 -
Glsi14g1256 482 SUPERFAMILY beta-beta-alpha zinc fingers 58 154 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1256 Glsi-ChrGlsi14 13634374 13636548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1256 21 448 IDZ Gene Family AT1G03840 49.593 4.68e-131 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Glsi14g1256 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1256 14 13634374 13636548 Glsi14g1256 14 13634374 13636548 ECH