Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1254 ATGGCCGAAGGCGAAAGATCCCTTGAAGATACACCAACATGGGCAGTTTCAGTCTTTTGCTTATTCTTTCTTATAATATCTTTCGCCTTTGATGGTGGTCTTCATAAACTCGGCGAGTTTCTCAGGAAAAGGAAAAGAAAGTCCCTAAGTAAGGCTTTGATCACAACCAAAACAGTACCCATATCGAAAATCTGCATCAACAAGTCTGTGGCAAACTCTTTTCTCCCGTGTAAACATCCCTCGGAGTACTCAGCGACACCAGCTTCTGCGTCCGCCACTCAGGTCTCTGCCTCAGAATTTAATAAAACACTTACAGATGAAGCCGCAGATGAGGTCAACTATTGTGAAGCAAAGGGCATGGTTTCTTTGGTGTCAAGTGAAGGAATCCAGCAGCTAAATATCTTCATTTCCGTTTTGGCATTGTTCCATATCTTGTACTGCACATTAACCATGTGCCTTGGGATGGCCAAGATGAGAAGATGGAAAAGATGGGAGAACGAGACCCTAACACTTGAATATCAGATAGCTAACGATCCAAGAAGGTTTCAGATTACAAGTCAAACCTTGGTTGGCAAGCGTCATTTGAAATTTTGGAGTAAATACCCTCCCTTGCTTTGGATGGTTTGTTTTATACGACAGTTCTATGGGTCAGTCACAAAAGCTGATTACTTTACTCTACGAAATGGGTTCATTGCTGCTAACATTTCTGTAGGCAGCAAGTTCAACTTCCAGAAATTTCTAAGCCGCGCTTATGATGACGACTTTGAGATGATTGTTGGAATCAGGTTTTGGATCTGGATTTTCTCCATACTATTCATATTTCTGAGTGCACATGAGTTCTATGATCATTACTGGCTTCCTTTTATTCCACTTGTGGTCGCTCTAGTTGTGGGGACAAAACTGCAGGTGATAATAACCAAATTGTGTGTGGAGAGTAGCAAAGAAAGACCAGTGACCACAGGAGCTCTACTTGTGAGACCCAATGATGACTATTTCTGGTTTGGTCGTCCTGACTGGCTTCTCCATCTGCTTCAGTTCATTCTCATCCAGTATGAATATGGTGTAAGGTCTTGCTTCAATGGAGAAAAAGAGAACATTGCCATAAGAATCGCCATGGGTGTAGTTGTGCAGCTTCTTTGCGGTTATGTGACTCTGCCCCTATATGCACTAGTTACCCAGATGGGTTCTAGCATGAGGAAAGCTATGTTCAGTGATCGCGTTGTTAAAGGCCTCAAGAATTGGCACAGAAACGCCAAACGATCTCTTTCCGAAAACAGTTCAACGACAGGAAGACATTCCATTTCTTTGGATCCCCAAGAACAAGACAACTCAACTTCAAACACACACTCAGCTTCCTTACATTCGAAACCAAATGATGATGGAGTAAGCCCTCCTTCTGGAAGCAGAGACGAGAGAGAGGAAATTGAAGATCCCCATAAACAAGAGATATCGAGTCATTCAACTTCAGAAATCACGAGTATTGAGGAACCAAACTCCATGGTCATCACCAGAGGAACCTATGACGGTGAGATCTCCTTCGGAAGCAGCTGGAAGCAAATGGAGACTAGTAGCGGGGGAACTGGGGAAATCAATTCAATAATTGAAGAGGATGACTCAGACATAGTACCCGAGCTTTCTCAACTGAGACGATCGGAAGCTAGGAAAATGAATTTTAAGAACATGAAGGTTCCAAACGTTCCAGGTGGTGGTGGTGCATCCTCCGCGTTGCTTAAGCTGGGGATCGTTGGTGGGCTTGGCTTGTATGCAGCTTCTAACTGTCTTTACAATGTCGAGGGAGGTCATCGGGCTATCATTTTCAACCGCATAGTTGGTGTCAAAGAAAAGGTCTATCCTGAAGGGACACATTTTATGATTCCATGGTTTGAAAGGCCAGTCATCTATGATGTCCGTGCACGACCTCATCTAGTTGAGAGTACATCAGGGAGTCGTGATCTCCAGATGGTGAGAATTGGGCTTCGAGTTCTTACCCGTCCTTTACCAAGCCAATTACCTACAATTTATCGGACTGTTGGTGAAAATTATAATGAAAGGATTTTACCTTCAATTATACATGAAACTTTGAAAGCTGTGGTAGCACAATACAATGCCAGCCAGCTTATTACTCAGAGAGAGGCTGTTAGTAGGGAAATCCGGAAGGTTCTGACTGAAAGGGCTGCCAACTTCAATATTGCACTTGATGATGTATCAATTACAGTACTGACCTTTGGCAAGGAGTTCACAGCTGCAATTGAAGGCAAGCAAGTGGCTGCACAAGAAGCTGAGAGGGCTAAATTTGTTGTGGAAAAAGCTGAGCAGGACAAGAGAGGTGCTGTGATTAGAGCACAGGGTGAGGCAAAAAGTGCTCAACTGATCGGTGAAGCAATTGCCAACAATCCAGCTTTTATTGCTCTGAGAAAGATAGAGGCTGCAAGAGAGATCGCACAAACTATGTCAAATGCAGCAAACAAGGTTTATTTGAATTCGGATGATCTGTTGCTGAATCTTCAGGACATGAATTTGGAGCCAAGCAGAAAGTGA 2538 0.4346 MAEGERSLEDTPTWAVSVFCLFFLIISFAFDGGLHKLGEFLRKRKRKSLSKALITTKTVPISKICINKSVANSFLPCKHPSEYSATPASASATQVSASEFNKTLTDEAADEVNYCEAKGMVSLVSSEGIQQLNIFISVLALFHILYCTLTMCLGMAKMRRWKRWENETLTLEYQIANDPRRFQITSQTLVGKRHLKFWSKYPPLLWMVCFIRQFYGSVTKADYFTLRNGFIAANISVGSKFNFQKFLSRAYDDDFEMIVGIRFWIWIFSILFIFLSAHEFYDHYWLPFIPLVVALVVGTKLQVIITKLCVESSKERPVTTGALLVRPNDDYFWFGRPDWLLHLLQFILIQYEYGVRSCFNGEKENIAIRIAMGVVVQLLCGYVTLPLYALVTQMGSSMRKAMFSDRVVKGLKNWHRNAKRSLSENSSTTGRHSISLDPQEQDNSTSNTHSASLHSKPNDDGVSPPSGSRDEREEIEDPHKQEISSHSTSEITSIEEPNSMVITRGTYDGEISFGSSWKQMETSSGGTGEINSIIEEDDSDIVPELSQLRRSEARKMNFKNMKVPNVPGGGGASSALLKLGIVGGLGLYAASNCLYNVEGGHRAIIFNRIVGVKEKVYPEGTHFMIPWFERPVIYDVRARPHLVESTSGSRDLQMVRIGLRVLTRPLPSQLPTIYRTVGENYNERILPSIIHETLKAVVAQYNASQLITQREAVSREIRKVLTERAANFNIALDDVSITVLTFGKEFTAAIEGKQVAAQEAERAKFVVEKAEQDKRGAVIRAQGEAKSAQLIGEAIANNPAFIALRKIEAAREIAQTMSNAANKVYLNSDDLLLNLQDMNLEPSRK 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1254 845 Gene3D Band 7 domain 623 756 IPR036013 -
Glsi14g1254 845 PANTHER PROHIBITIN 556 841 IPR000163 GO:0016020
Glsi14g1254 845 Coils Coil 753 773 - -
Glsi14g1254 845 CDD SPFH_prohibitin 594 788 IPR000163 GO:0016020
Glsi14g1254 845 SUPERFAMILY Band 7/SPFH domain 625 761 IPR036013 -
Glsi14g1254 845 MobiDBLite consensus disorder prediction 485 500 - -
Glsi14g1254 845 FunFam Prohibitin 2 622 756 - -
Glsi14g1254 845 Pfam SPFH domain / Band 7 family 596 771 IPR001107 -
Glsi14g1254 845 SMART PHB_4 593 754 IPR001107 -
Glsi14g1254 845 PRINTS Prohibitin signature 678 696 IPR000163 GO:0016020
Glsi14g1254 845 PRINTS Prohibitin signature 701 717 IPR000163 GO:0016020
Glsi14g1254 845 PRINTS Prohibitin signature 655 674 IPR000163 GO:0016020
Glsi14g1254 845 PRINTS Prohibitin signature 724 743 IPR000163 GO:0016020
Glsi14g1254 845 PRINTS Prohibitin signature 749 772 IPR000163 GO:0016020
Glsi14g1254 845 PRINTS Prohibitin signature 772 788 IPR000163 GO:0016020
Glsi14g1254 845 PRINTS Prohibitin signature 637 653 IPR000163 GO:0016020
Glsi14g1254 845 MobiDBLite consensus disorder prediction 465 484 - -
Glsi14g1254 845 MobiDBLite consensus disorder prediction 420 462 - -
Glsi14g1254 845 MobiDBLite consensus disorder prediction 418 501 - -
Glsi14g1254 845 Pfam Mlo family 5 450 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1254 Glsi-ChrGlsi14 13608088 13617243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1254 1 499 MLO family AT2G39200 41.392 1.29e-138 422