Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1252 ATGTTCCAATCAAAATTGTTAGTTATTCATAATTTTCAGGTGGAGCGTGATGACACTGATGAAAGAGCATTTCACATTGGTTACTGGTGGACTGGTGGCAATTTCTTATTGGTTCTTTATTTGTTTGGTGGATTGAGAGGGAAAGCTGCTTTGGAAGAAAAAAATGACGATCCAACCCCATTTCACACAGCCCATGGGATGGCCATTTGGGAATATGCAGGTCATAAGCCAAAGCTCAATCATCTATTCAACAATGCCATGTTGAGTGATTCTCATTTAGATTCAAGTGCAATGCTTGGAAAGTGCAAGGGGGTTTTTGAAGGATTAGAGTCACTGGTAGATGCTGGGGGAGGTACTGGAACTATGGCAAAGGCCATTGCCCAATCCTTCCCACACATGAAATGCTGCGTGTTAGATCTTCCACATGTGGTTGCTGGCTTGCAAGGGACCAACAACTTGAACTATATTGGAGGAGACATGTTTGAAGCAATTCCTCCTGCAGATGCAATTCTATTGAAGTGGATATTGCACGACTGGTGCGATGAAGAATGTGTGAGGATACTTAGGAAGTGCAAGGAGGCAATTTCGGCAAGTGGGAAGACAGGTAATAAGGTGATCATTATAGACATGGTGGTGGAGCCCCGTAACAAAGACCATGAGTGGGTTGAAACACAACTCTGCTTTGACATGTTGATGATGGTGCAGTCTACAGGAAGAGAAAGAAGTGAGCAAGAATGGGCTAAGCTATTTTACACTGCAGGTTTCACTGACTACAAGATAACCCCTGTTTTGGGTTTGAGGTCTATCATTGAAATTTATCCACAGAAAGAGTTTCGTTATACTTTGCATGAAGCTTAA 858 0.4254 MFQSKLLVIHNFQVERDDTDERAFHIGYWWTGGNFLLVLYLFGGLRGKAALEEKNDDPTPFHTAHGMAIWEYAGHKPKLNHLFNNAMLSDSHLDSSAMLGKCKGVFEGLESLVDAGGGTGTMAKAIAQSFPHMKCCVLDLPHVVAGLQGTNNLNYIGGDMFEAIPPADAILLKWILHDWCDEECVRILRKCKEAISASGKTGNKVIIIDMVVEPRNKDHEWVETQLCFDMLMMVQSTGRERSEQEWAKLFYTAGFTDYKITPVLGLRSIIEIYPQKEFRYTLHEA 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1252 285 Pfam O-methyltransferase domain 50 255 IPR001077 GO:0008171
Glsi14g1252 285 Gene3D Vaccinia Virus protein VP39 45 274 IPR029063 -
Glsi14g1252 285 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 274 IPR016461 GO:0008168
Glsi14g1252 285 FunFam O-methyltransferase ZRP4 45 274 - -
Glsi14g1252 285 PANTHER O-METHYLTRANSFERASE 51 259 IPR016461 GO:0008168
Glsi14g1252 285 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 56 272 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1252 Glsi-ChrGlsi14 13510280 13516019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1252 56 261 Monolignol Biosynthesis Gene Families AT5G54160 37.981 1.62e-44 152