Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1241 ATGGCGCAATTACCTCCCAAGATCCCAAACTTGACACCCAGTTGGCCTGGCTTTTCGTCTCACCAAAAGATACCTTCCCTCGCAAGTTTGCCACCAAATGCGGGCACCAACACTACCCATCAGAACCCTTCTTGGGTAGATGAATTCCTCGACTTCTCGTCGGCAAGGCGTGGGGCTCACCGCCGCTCCATGAGTGATTCCATTACCTTCCTTGAGGCGCCAATGCTGGACGATTGCCGTGGTAACTCTGCCATCCCACCGAGCTCTGGGGCTGAGAATGAGTTTGACAGGTTTGATGATGAGCAATTCATGTCTATGTTCACTGATGATATATCTGGGGCTCCCATGCCACCCACCATGTCCTCCTCAAACCCTTCAAGCCCGTCTGATCATAATAGCATTAATGACGAGAAAGAAACGGACCAATACCAGAAGCAGCCCAAGGAGAAGAAGGAGAAGGAGAAGGAGCAGGAGGACCAGCAACAGCAGCAGTTGAAACATGAATCCGATGAGGTTGAAAGTCAATGCGAACAGGAAACACAAGCTCCAAATAACACAAACACAATTTCTTCCACTGACAAAATTACTGACCCTAAGAGGGTCAAAAGAATCTTGGCAAACAGACAATCTGCACAAAGGTCACGAGTGAGAAAGCTGCAATACATATCAGAGCTTGAACGAAGTGTAACTTCATTACAGACCGAAGTTTCAGTGCTGTCTCCAAGGGTTGCATTTCTAGATCATCAACGCTTGCTTCTAAATGTTGACAACAGTGCACTCAAGCAAAGAATCGCCGCCCTTGCCCAAGACAAGATCTTTAAAGATGCTCATCAAGAGGCACTGAAGAGGGAGATAGAGAGGCTAAGGCAAGTGTATCACCATCAGAACCTGAAGAAGATGGAAAATGCTGCAGGGTCCCCACCATCCCCATCACCCAAACCACTATGTGATGCTAAGACAGAAAAGGAACAGCTTCTCAATGTTTGA 987 0.4772 MAQLPPKIPNLTPSWPGFSSHQKIPSLASLPPNAGTNTTHQNPSWVDEFLDFSSARRGAHRRSMSDSITFLEAPMLDDCRGNSAIPPSSGAENEFDRFDDEQFMSMFTDDISGAPMPPTMSSSNPSSPSDHNSINDEKETDQYQKQPKEKKEKEKEQEDQQQQQLKHESDEVESQCEQETQAPNNTNTISSTDKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHHQNLKKMENAAGSPPSPSPKPLCDAKTEKEQLLNV 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1241 328 Coils Coil 278 298 - -
Glsi14g1241 328 Coils Coil 148 182 - -
Glsi14g1241 328 SUPERFAMILY Leucine zipper domain 199 253 IPR046347 GO:0003700|GO:0006355
Glsi14g1241 328 MobiDBLite consensus disorder prediction 132 174 - -
Glsi14g1241 328 FunFam Basic leucine zipper 61 198 271 - -
Glsi14g1241 328 MobiDBLite consensus disorder prediction 13 44 - -
Glsi14g1241 328 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 202 217 IPR004827 GO:0003700|GO:0006355
Glsi14g1241 328 MobiDBLite consensus disorder prediction 298 328 - -
Glsi14g1241 328 SMART brlzneu 195 259 IPR004827 GO:0003700|GO:0006355
Glsi14g1241 328 MobiDBLite consensus disorder prediction 1 44 - -
Glsi14g1241 328 MobiDBLite consensus disorder prediction 176 194 - -
Glsi14g1241 328 MobiDBLite consensus disorder prediction 108 201 - -
Glsi14g1241 328 Pfam bZIP transcription factor 199 242 IPR004827 GO:0003700|GO:0006355
Glsi14g1241 328 Gene3D - 198 297 - -
Glsi14g1241 328 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 197 249 IPR004827 GO:0003700|GO:0006355
Glsi14g1241 328 PANTHER BASIC LEUCINE ZIPPER 34 1 309 - -
Glsi14g1241 328 CDD bZIP_plant_RF2 200 250 IPR044759 GO:0003700|GO:0006355
Glsi14g1241 328 MobiDBLite consensus disorder prediction 115 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1241 Glsi-ChrGlsi14 13398663 13401063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1241 1 277 bZIP Transcription Factor Family AT3G58120 59.866 1.07e-101 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi14g1241 bZIP_1 3.8e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1241 14 13398663 13401063 Glsi14g1241 14 13398663 13401063 ECH