Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1238 ATGGGCATGAAGAGCACTGGAGGAGAGATTGTTCAAGTCCAAGGAGGCCACATTGTTCGATCCACAGGTCGAAAAGACCGTCACAGTAAAGTTTGCACTGCAAAAGGCCCTCGTGATCGCAGGGTTCGACTATCAGCCCACACAGCTATTCAGTTCTACGATGTTCAAGACCGTCTTGGCTATGACCGACCCAGCAAGGCCGTGGATTGGCTCATCAAGAAAGCTAAATCTGCCATTGACAAGCTTGCCGTGCTTCCTCCATGGCATCCTACTGAAGCCTTGGAATCCAGTTTTTCACCACCGGTTCGTGCTTGGAATGACATCCCAATGACTTCTTCGGAGCATCACAAGTCACAACCAGTTCACCAAGCTTCGATCTTTGGCAGCCGGTTTCTGTCTGATGGAATACCCGGGTTCTGCATTCCCGCGGGAATTCAAGGTGAGGAGGATGACCATGGGATTGCTTCTGATAGGCCATCTTCTGCTTCTCCCAATTCCCATCACTGA 507 0.5069 MGMKSTGGEIVQVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLAVLPPWHPTEALESSFSPPVRAWNDIPMTSSEHHKSQPVHQASIFGSRFLSDGIPGFCIPAGIQGEEDDHGIASDRPSSASPNSHH 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1238 168 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Glsi14g1238 168 Pfam TCP family transcription factor 23 87 IPR017887 -
Glsi14g1238 168 MobiDBLite consensus disorder prediction 142 168 - -
Glsi14g1238 168 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 123 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1238 Glsi-ChrGlsi14 13384164 13385165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1238 8 94 TCP Transcription Factor Family AT3G15030 88.506 1.21e-51 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Glsi14g1238 TCP 1.1e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1238 14 13384164 13385165 Glsi14g1238 14 13384164 13385165 ECH