Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1217 ATGCATAGCTTCAGTGTTTCTATTGGGAAATATCCGGGGACGAGGCCGTTGATGCGGAGGAATCGAGACTCAAATGCTATTGGGCGAAAAAGAGTGAGGTTAATTACAGGTTTGATATCTAGTGGTTTTATGTGGCGTACCAATGAAAAGGGTATGTCAGAAATGTCTCAACTTTCATCAAGAGGTTTACTCCACATGGACATGGAGGAAACACGAGAAGATGCAGGGCCAGCAGAGCAAGGGCCCTCTAGTGCTTCATGGTGGCCTTCAGACTTTGTTGAAAAATTTGGATCTGTTTCTTTGGGGTCTCAAGATGAGACCTTAAATAATAAAGAATCACCTAGACATTTTGAGCAAGATGTTTTGTCACCTCATAATGCATCACAAATTCTCTGGCAGACTGGAATGCTTTCAGAACCAATACCAAATGGTTTTTATTCAGTTATTCCGGAGAAAAGACTGAAGGAACTTTTTGATAGTATTCCTACTTTGGATGAGCTTCTTGCTTTGGGTGGAGAGGGTTTTAGGGCTGATATCATTCTTGTGGATGCGGAAAAAGATAAAAAGCTATCCATGTTGAAGCAACTGATCATGACACTAGTTAAAGGATTGAACTCAAATCCAGCTGCTATTATTAAGAAGATAGCTGGATTAGTTTCTGATTTCTACAAGAGGCCCAATGTGGAAAGTCCAGCAAAAGCTGCACTAGAAGAAACCTCCCACATGTCTGAGAATCGAGGTGTCCAGTTGCTGGGGCAAATAAGGCATGGTTCATGCCGTCCTCGAGCAATCTTATTTAAAGTTTTAGCGGATACTGTAGGCCTGGAAAGTAAAATAATGGTGGGTTTGCCAAATGAAGGAGTTATTGAATGTGTAGATTCATACAAGCATATGTCTGTGATAGTTGTATTAAATTCTGTGGAGCTACTGGTAGATCTCATGCGATTCCCTGGCCAATTATATACACGATCAACCAAGGCGATTTTTATGACGCATATTTCCGCAGCAGGGGAGAGTGATTCTGCAGAAAATGATTCCTGTGATTCGCCACTTGAACCAAACAGTCCTTTATATGGGTTTTCAGAGAGAGTAGATCTTGATAGCGCTGAAAGAGATGAAAATCTCCAATTCCATAGACGCCTTGAAGCATCATCGAATTTACCTGGCCTTTCTCTGCGAAACATGATGTTACGTTCAAATACCAGTCTGGACAGGAAATTGAATTTGTCTCATAGTGAACCCAACATTGCAACTGCATTTGGTCGGCGTAGTCGGAGAAAGGTCATTGCTGAACAGAGGACAGCTAGTTCAAGTCCAGAACATCCCTCATTTCGAGCACGTGCGCGGTCCATGCTCAGTGGTGATAGGCAATCATTTAGAGATTTTGCTGATGATGGGGCTACATCGAGGTCAGATGGTGCATCCTCATCAGAAGCTCGTAGGATAAGAAGAAGAAGCATCAGCATTACACCCGAAATTGGTGATGATATCGTAAGGGCTGTACGAGCAATGAATGAAACACTGAAGCAGAATCGTCTTTTGAGAGAGCAGGGGGATGATAGCTCATTCTCACATTCTCCAATTGATAGAAGTAGCGGTGGTGATCTTCAGAAAAATGTGTCAAATTTCCATCTTGGTCATGATGAAAGGTCTGCTTTATATTCACGTCCGGGCGACCAAGTAACTTCTGAAAAAGCAATGTCATTACCCTCTTCACCACATGAATATAGGGGTGAAGCATCTGGGAGAAGCGGGCCATCAGGATATGGAGTGAATAATGAACTGGAATTGACGTGGAATAAAGTCCTTGAATCTCCAATGTTCAATAATAAACCTCTATTACCATATGAAGAATGGAATATTGACTTCTCAGAATTGACTGTTGGAACTCGTGTTGGGATTGGGTTCTTTGGAGAAGTTTTCCGAGGCATATGGAATGGGACAAAAGTTGCAATTAAAGTTTTTCTGGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTCTGCAATGAGATATCCATTCTCAGCCGGCTTCGACACCCTAATGTTATTTTATTTCTTGGTGCATGCACAAAGCCTCCACGCTTGTCAATGGTTACTGAGTATATGGAGATGGGATCATTATATTACTTGATCCATTTGAGTGGTCAAAAGAAAAAGCTTAGCTGGCGGAGAAGACTAAAGATGTTGCGTGATATATGCAGGGGGCTGATGTGTATGCATCGGATGAAGATAGTTCACCGTGACCTGAAAAGTGCAAATTGTCTTGTGAATAAGCACTGGACTGTGAAGATATGTGATTTTGGGCTTTCAAGAATAATGACAGAGTCTCCCATGAAAGATTCTTCATCAGCTGGAACTCCTGAATGGATGGCTCCTGAACTCATTCGAAATGAACCATTCACTGAAAAATGTGATATCTTTAGCCTGGGGATCTTAATCTGGGAGCTCTGCACTTTAAATAGGCCATGGGAAGGCATACCACCGGAGAGAGTCGTTTATGCCGTTGCTAATGAGGGATGCAGGCTGGAGATTCCTGAAGGTCCGCTAGGCAGGCTGATTTCAGATTGTTGGGCAGAACCACATGAGCGGCCAAATTGTGAGGAGGTCCTTTCCCGTTTGCTTGACTGCGATTTCCCAGTCGGACTTACCATATTGTCTGACCACCAAACCCATTGTTATCAACCGGCACTTGATTTCAAGTTCAAACACACAACCGCACCGCCTCCGCTTCTCCAGTTGAACGCCGCCACCTCAGCACTGCCACCTCTCATGGACTCCCTCATGGGAGCTCCGACGCCGGCCGCCATAACTCCGTCCCGGCCTTCTTCGTCGCCGTTCCCTGGACGGGAAGACTGCTGGAGTGAGGACGCCACCTTCACTCTCATAGATGCTTGGGGTGAACGTTACCTCGACCTCAATAAAGGACACCTCCGTCAGAAACACTGGAAAGAGGTCGCCGACGCCGTCAACGCCCATCACGGTCACGTCAAGAAGGCTCGGCGAACCGACGTCCAGTGCAAGAACCGCATCGATACCCTTAAGAAGAAGTACAAGATCGAGAAGAATAGGGTTTTCGACTCCGATGGTAACTACACTAGCTCATGGCCTTTCTTTGCTCGCCTCGATTCTCTCATCGGCGATAGTTTTCCTGTCAAGAGACACTCACTGCCGGTCGACGGTGACCGCCGTAGTACCCCTCTCTCGAAGCCTCTGGCCTGGATAACCTCGCACGTACCAGTTGGTCCCCGATCCGGGACTCAAAAACGGCCGGCACAGTTGCCGGCATCGGTGAACATGGACGATTCGTACTTCCGCCGGAATTTTTCAGCTTTTGCAGCGGCAGCTGCAGCTGCGGCTGAGGCAGACGACGCAGACAGTGACGATTCGGATGGGTCGAGGTCGAGCACTGCCACTGGGATTAGGAGTAGGAAGAAGGGAAGGGGAAGAATGAGGGGAGGGGAGAAACACAGGGACAGTGATAGGGATTCGGAATTTGGGTACAGGGAGCTGGCACAAGCCATAGAGAGGTTCGGAGAAATATACGAGAGAGTAGAGGCGGCGAAGCAGAGGCAAATGGTAGAGTTAGAGAAACAGAGGATGCAATTTGCTAAGGATTTGGAGTACCAGAGGATGCAGCTTTTCATGGAAACGCAGGTTCAGCTTCAAAAAATCAAGCGCGCCAAGCGATCTTCTCGCGCTGGTGAGACTTTATTCACATTTATGTTTATTACTGCATTTGTGAAGCATGTCGTTTTGCTTTATCTCATGTCTTCATGTTACTATTGGGTCAGTGCAGACCGCATTACAAATCTAGCTTGA 3822 0.4581 MHSFSVSIGKYPGTRPLMRRNRDSNAIGRKRVRLITGLISSGFMWRTNEKGMSEMSQLSSRGLLHMDMEETREDAGPAEQGPSSASWWPSDFVEKFGSVSLGSQDETLNNKESPRHFEQDVLSPHNASQILWQTGMLSEPIPNGFYSVIPEKRLKELFDSIPTLDELLALGGEGFRADIILVDAEKDKKLSMLKQLIMTLVKGLNSNPAAIIKKIAGLVSDFYKRPNVESPAKAALEETSHMSENRGVQLLGQIRHGSCRPRAILFKVLADTVGLESKIMVGLPNEGVIECVDSYKHMSVIVVLNSVELLVDLMRFPGQLYTRSTKAIFMTHISAAGESDSAENDSCDSPLEPNSPLYGFSERVDLDSAERDENLQFHRRLEASSNLPGLSLRNMMLRSNTSLDRKLNLSHSEPNIATAFGRRSRRKVIAEQRTASSSPEHPSFRARARSMLSGDRQSFRDFADDGATSRSDGASSSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLREQGDDSSFSHSPIDRSSGGDLQKNVSNFHLGHDERSALYSRPGDQVTSEKAMSLPSSPHEYRGEASGRSGPSGYGVNNELELTWNKVLESPMFNNKPLLPYEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTKVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLYYLIHLSGQKKKLSWRRRLKMLRDICRGLMCMHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIMTESPMKDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGILIWELCTLNRPWEGIPPERVVYAVANEGCRLEIPEGPLGRLISDCWAEPHERPNCEEVLSRLLDCDFPVGLTILSDHQTHCYQPALDFKFKHTTAPPPLLQLNAATSALPPLMDSLMGAPTPAAITPSRPSSSPFPGREDCWSEDATFTLIDAWGERYLDLNKGHLRQKHWKEVADAVNAHHGHVKKARRTDVQCKNRIDTLKKKYKIEKNRVFDSDGNYTSSWPFFARLDSLIGDSFPVKRHSLPVDGDRRSTPLSKPLAWITSHVPVGPRSGTQKRPAQLPASVNMDDSYFRRNFSAFAAAAAAAAEADDADSDDSDGSRSSTATGIRSRKKGRGRMRGGEKHRDSDRDSEFGYRELAQAIERFGEIYERVEAAKQRQMVELEKQRMQFAKDLEYQRMQLFMETQVQLQKIKRAKRSSRAGETLFTFMFITAFVKHVVLLYLMSSCYYWVSADRITNLA 1273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1217 1273 SMART serkin_6 626 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1217 1273 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 380 874 - -
Glsi14g1217 1273 MobiDBLite consensus disorder prediction 424 483 - -
Glsi14g1217 1273 Coils Coil 1182 1202 - -
Glsi14g1217 1273 FunFam trihelix transcription factor ASIL2 954 1020 - -
Glsi14g1217 1273 ProSiteProfiles Protein kinase domain profile. 626 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1217 1273 MobiDBLite consensus disorder prediction 1 23 - -
Glsi14g1217 1273 Gene3D - 954 1020 - -
Glsi14g1217 1273 Pfam Ethylene-responsive protein kinase Le-CTR1 126 320 - -
Glsi14g1217 1273 Gene3D Transferase(Phosphotransferase) domain 1 705 888 - -
Glsi14g1217 1273 SUPERFAMILY Protein kinase-like (PK-like) 601 874 IPR011009 -
Glsi14g1217 1273 MobiDBLite consensus disorder prediction 553 589 - -
Glsi14g1217 1273 ProSitePatterns Protein kinases ATP-binding region signature. 632 653 IPR017441 GO:0005524
Glsi14g1217 1273 MobiDBLite consensus disorder prediction 512 541 - -
Glsi14g1217 1273 Gene3D Phosphorylase Kinase; domain 1 619 704 - -
Glsi14g1217 1273 FunFam Serine/threonine-protein kinase isoform 1 616 704 - -
Glsi14g1217 1273 Pfam Myb/SANT-like DNA-binding domain 951 1045 IPR044822 -
Glsi14g1217 1273 CDD STKc_MAP3K-like 632 874 - -
Glsi14g1217 1273 ProSitePatterns Serine/Threonine protein kinases active-site signature. 745 757 IPR008271 GO:0004672|GO:0006468
Glsi14g1217 1273 MobiDBLite consensus disorder prediction 524 539 - -
Glsi14g1217 1273 Pfam Protein tyrosine and serine/threonine kinase 627 874 IPR001245 GO:0004672|GO:0006468
Glsi14g1217 1273 MobiDBLite consensus disorder prediction 1121 1164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1217 Glsi-ChrGlsi14 13221635 13239178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1217 68 879 MAP Kinase Kinase Kinase AT3G58640 71.429 0.0 1199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Glsi14g1217 PK_Tyr_Ser-Thr 8e-61 CL0016
TF Trihelix Glsi14g1217 PK_Tyr_Ser-Thr 8e-61 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1217 14 13221635 13239178 Glsi14g1217 14 13221635 13239178 ECH