Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1213 ATGGCTGAGAGTATTTACATATCTGACCAAGACAAGAGCGAATTAGGTAATGATTTTCAAGCAAAATCCGCTTCTCTAAGTCCTCAGAAACGCTCGTTCTTCGACTTGAATGAAGAAGCAGCTGATGATATTGGTGACACCAGGATTATTAATGATAGATCATCATCTCCAGAAGGTAATTTGAGCTGCAATAACTCAAGTACAGAAGGTAAAGAACGATCAATTGGCGTTAGGCAATATGTGCGCTCCAAAATGCCAAGGCTCCGTTGGACTCCTGATCTCCATGTAGCTTTTGTGCTTGCTGTTGAGAGGCTTGGTGGACAGGAAAGAGCAACACCCAAGTTGGTTCTTCAGCTGATGAATGTCAGAGGACTTAGCATTGCACATGTAAAAAGTCATTTGCAGATGTATCGAAGTAAAAAACTTGATGAGTCTGGCCAAGGCCAGTGGAGCAAGGATTCAGAACTATCTGAGGTCACTAACGAAAGAACGCTATTGCAGAGAAGCAAAAGGATGAGGAACTCACACCTATTTGATGTAAGGGCCTCAATAACAAGAAGTGAACCTCTTAGAGGTAGCCAATTTCTTGAAGAAAAGAAATGGCCTCCTCGTGGAATGGCTGGATCACAAGGCAATAATAGACAGGAATCTGCAACCATGTCATGGGATGACAAGTTTAATATTGCAAACCCTTCTCTGTGGGCAACTTCCAGCCATGATCAATATCAACGTAGTTCTTCTGGTCCAATATTCTTCCCTAGCCATGTGCAGTTTGATTCTAAGGTTCACAATGATCTAAAAGAGGGAGTGCTCCGATTTACAAATGAGGAGCAGTTGTCGCAACCAAAGGTTAAAACGCCATCAGAGAGGTTGAAGGAGAAGAAAGGGTTACCAAGTTTTTTAGAGCTAAGTATAAGCCGGGATTTTGGAAATGTTAGAGAGATGAACTCTGGTCCAGAAAGTGAACAGGAAGTTAATACGATGCTTTCTCTTTCGTTGTTCCCCTCATCAAAGCAGCAAGAAACACAATCTGATCAATAA 1041 0.4207 MAESIYISDQDKSELGNDFQAKSASLSPQKRSFFDLNEEAADDIGDTRIINDRSSSPEGNLSCNNSSTEGKERSIGVRQYVRSKMPRLRWTPDLHVAFVLAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQGQWSKDSELSEVTNERTLLQRSKRMRNSHLFDVRASITRSEPLRGSQFLEEKKWPPRGMAGSQGNNRQESATMSWDDKFNIANPSLWATSSHDQYQRSSSGPIFFPSHVQFDSKVHNDLKEGVLRFTNEEQLSQPKVKTPSERLKEKKGLPSFLELSISRDFGNVREMNSGPESEQEVNTMLSLSLFPSSKQQETQSDQ 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1213 346 NCBIfam myb-like DNA-binding domain, SHAQKYF class 86 141 IPR006447 GO:0003677
Glsi14g1213 346 MobiDBLite consensus disorder prediction 50 73 - -
Glsi14g1213 346 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 82 142 IPR017930 -
Glsi14g1213 346 MobiDBLite consensus disorder prediction 49 74 - -
Glsi14g1213 346 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 65 177 IPR046955 GO:0003700
Glsi14g1213 346 Gene3D - 85 142 - -
Glsi14g1213 346 FunFam Myb family transcription factor 84 142 - -
Glsi14g1213 346 Pfam Myb-like DNA-binding domain 88 138 IPR001005 -
Glsi14g1213 346 SUPERFAMILY Homeodomain-like 84 140 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1213 Glsi-ChrGlsi14 13197017 13199689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1213 77 145 G2-like Transcription Factor Family AT2G42660 79.710 4.62e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi14g1213 Myb_DNA-binding 7.9e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1213 14 13197017 13199689 Glsi14g1213 14 13197017 13199689 ECH