Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1209 ATGGAGACTGATGATGGGTATAGGAGGAAGGAGCAGATTGCACTAATCGCCATTGTGGTGCTTTCTTCCCTAGCTTTGGTCTCTTTGCTGGTTGCCTTCGGTTACTATTGCTACATCCGGTGTAAGGTCTCCAAGCGCCACAAGAACCAAAAAACTGCTGAACTTAACAAGAAACGTGACTTCGCAAATCTGCAAGTTGTTGCTGATAAAGGACTTCAGGTGTTCACTTTCAAGCAGTTGCATTCTGCAACTGGTGGCTTCAGCAAGTCAAATGTGGCTGGCCATGGTGGATTTGGACTTGTTTACCGGGGAGTGCTCAATGATGGCAGGAAAGTTGCAATTAAATTCATGGATCAGGAAGGAAAGCAAGGAGAAGAGGAGTTTAAAGTAGAGTTGGAATTGCTTAGTCGGTTGCGCTCTCCATATTTGCTGACGTTGCTTGGGTACTGCTCTGATAATAATCATAAATTGCTGGTGTACGAGTTCATGGAAAATGGTGGTCTGCAGGAACATCTTTATCCTGTCAGCAATTCTAATGTTATACCTATGAAATTGGATTGGGAGACCCGGTTAAGAATAGCTCTTGAAGCTGCTAAGGGTTTGGAATATCTTCATGAACATGTTGGCCCACCCGTGATTCATAGAGATTTTAAGAGCAGCAACATCCTCTTGGACCAAAAGTTTCATGCAAAAGTTTCTGATTTTGGATTAGCCAAACTTGGATCTGAGAGAGCCGGTGGACATGTTTCCACTCGAGTTTTGGGCACCCAGGGATATCTTGCCCCTGAATATGCACTAACTGGGCATTTAACAACAAAATCAGATTTGTACAGTTATGGTGTTGTACTTTTGGAGCTGTTAACTGGTCGAGTGCCAGTTGATATGAAGAGACCTCCAGGGGAAGGCGTTCTTGTTTCATGGGCTTTGCCCCTTTTGACTGATAGAGAAAAGGTTGTAAAGATTATGGATCCTGCATTGGAAGGTCACTACTCAATGAAAGAGGTTATCCAGGTAGCGGCAATTGCTGCAATGTGTGTACAACCAGAGGCAGATTATAGGCCACTCATGGCAGATGTTGTGCAGTCATTGGTTCCACTGGTGAAGACTCGCAGGTCAACCTCAAAGGTAGGCAGCTACCCAAGTTTCCATGCCAATAGGTTGTCCCCGGCTCAGGATTCAGTCAAAGCAAATATATAA 1197 0.4453 METDDGYRRKEQIALIAIVVLSSLALVSLLVAFGYYCYIRCKVSKRHKNQKTAELNKKRDFANLQVVADKGLQVFTFKQLHSATGGFSKSNVAGHGGFGLVYRGVLNDGRKVAIKFMDQEGKQGEEEFKVELELLSRLRSPYLLTLLGYCSDNNHKLLVYEFMENGGLQEHLYPVSNSNVIPMKLDWETRLRIALEAAKGLEYLHEHVGPPVIHRDFKSSNILLDQKFHAKVSDFGLAKLGSERAGGHVSTRVLGTQGYLAPEYALTGHLTTKSDLYSYGVVLLELLTGRVPVDMKRPPGEGVLVSWALPLLTDREKVVKIMDPALEGHYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKTRRSTSKVGSYPSFHANRLSPAQDSVKANI 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1209 398 PANTHER OS07G0668900 PROTEIN 49 372 - -
Glsi14g1209 398 FunFam Receptor-like serine/threonine-protein kinase ALE2 163 378 - -
Glsi14g1209 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Glsi14g1209 398 SUPERFAMILY Protein kinase-like (PK-like) 70 363 IPR011009 -
Glsi14g1209 398 ProSiteProfiles Protein kinase domain profile. 87 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1209 398 Pfam Protein kinase domain 89 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1209 398 FunFam Serine/threonine-protein kinase PBS1 54 162 - -
Glsi14g1209 398 Gene3D Transferase(Phosphotransferase) domain 1 163 380 - -
Glsi14g1209 398 CDD STKc_IRAK 94 366 - -
Glsi14g1209 398 Gene3D Phosphorylase Kinase; domain 1 45 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1209 Glsi-ChrGlsi14 13167394 13170242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1209 1 394 Receptor kinase-like Gene Family AT3G58690 76.826 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Glsi14g1209 Pkinase 1.8e-43 CL0016