Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1208 ATGATTTTGACCAAACCAACCCAATCTGATCAAGTTGGATCCGGACATTCTTTCCTTTATGGAAGCATAGTAAAAACTGGTCAAATTGATCACTCTTCGGGTTCTCCTAAAAGGGATATCGTAGCACATGCAGTGAGAGACGAGTACGTATTTCTGTTTTCATCATACCTGACTCCAGAGGACCCCATGGACAGTACCTCGTGGCCGGAGAGATGTGCAAGAAAACAGCCAGCAATATTGCAGCCACCATATATATATAAAATCCCTTCACCATTCTCTGACCTAGCCATCGCCTCCACGCGACTTGACGGTCCTCTCCGGGCGGCCACACTAGAGGCAATCCTCAGAGACCTTGTGGCTGGCCGTGGCTTTCTTCATTCAGACCAAGTGCCTTTCAATTAGGCAAAGGAGAGAGAAAATAGACTCAGTAAGAGAGGGACAAAGGAGAGAGAGGGAGGGGGAGAAAGGGAGAGAGAGAGAGAGAGAGAGTGTCTTTGCGTCGTCTCTCACATGGCCTCCATGCCCTTGGGGCCGCACCACCATCAACAACTGCCAGCGACAGCTCCACACCCACCACCACAGTTACAGGCACAAGCGGAGAATGATCCACTGAAGCCTCGCCGTGGCTCCGATATGGAGACCGATAAGGACATGTCAGCTACTGTTATCGAGGGGAATGATGCAGTCACTGGCCACATAATCTCCACCACAATTGGAGGCAAAAATGGGGAACCTAAACAGACCATCAGTTACATGGCAGAACGTGTTGTTGGCACTGGATCGTTTGGAATTGTTTTCCAGGCAAAGTGCTTGGAGACTGGGGAAACAGTGGCTATAAAGAAAGTATTGCAGGACAGGCGTTACAAGAATCGTGAACTTCAGTTAATGCGCTTGATGGATCACCCAAATGTAATTTCTCTGAAGCACTGCTTCTTCTCTACAACTAGCAGAGATGAACTTTTTCTGAACTTGGTTATGGAATATGTCCCTGAGACGATGTACCGAGTTCTAAAACACTACAGTAGTATGAACCAGAGGATGCCCCTCATTTATGTGAAACTTTATACATACCAAATCTTTAGGGGACTAGCATATATCCATACTGTACCCGGAGTTTGCCACAGAGATGTGAAGCCTCAAAATCTTTTAGTTGACCCCTTAACACATCAAGTTAAGCTTTGTGATTTTGGGAGTGCAAAAGTTCTGGTCAAGGGTGAATCAAACATTTCGTACATATGTTCACGTTACTATCGAGCTCCAGAACTAATATTTGGTGCAACAGAATACACAACTTCTATTGATATCTGGTCAGCTGGTTGTGTCCTTGCTGAGCTTCTTCTAGGCCAGCCATTATTTCCGGGAGAAAACCAGGTGGACCAACTCGTGGAGATCATCAAGGTTCTCGGTACTCCAACTCGAGAAGAAATTCGGTGCATGAACCCCAACTATACAGACTTTAGATTCCCTCAGATTAAAGCTCACCCTTGGCACAAGGTTTTCCACAAGCGAATGCCTCCTGAAGCCATTGACCTTGCATCAAGGCTTCTCCAATATTCACCAAGTCTTCGTTGTACTGCGCTGGAAGCATGTACACATCCTTTCTTTGATGAGCTTCGTGAACCAAATGCACGACTACCCAATGGCCGCCCACTGCCCCCACTTTTCAACTTTAAACAGGAATTATCTGGAGCATCACCTGACTTGATCAATAGGCTTATCCCAGAGCATGTTAGGCGGCAGACTGGTCTAGGCTTCCCTCATCCGGCTGGTACATAG 1776 0.4679 MILTKPTQSDQVGSGHSFLYGSIVKTGQIDHSSGSPKRDIVAHAVRDEYVFLFSSYLTPEDPMDSTSWPERCARKQPAILQPPYIYKIPSPFSDLAIASTRLDGPLRAATLEAILRDLVAGRGFLHSDQVPFNXAKERENRLSKRGTKEREGGGERERERERECLCVVSHMASMPLGPHHHQQLPATAPHPPPQLQAQAENDPLKPRRGSDMETDKDMSATVIEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGESNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACTHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPDLINRLIPEHVRRQTGLGFPHPAGT 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1208 591 ProSiteProfiles Protein kinase domain profile. 251 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1208 591 CDD STKc_GSK3 246 538 IPR039192 -
Glsi14g1208 591 FunFam Glycogen synthase kinase-3 beta 235 330 - -
Glsi14g1208 591 MobiDBLite consensus disorder prediction 204 220 - -
Glsi14g1208 591 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 215 580 - -
Glsi14g1208 591 MobiDBLite consensus disorder prediction 136 156 - -
Glsi14g1208 591 FunFam Shaggy-related protein kinase kappa 331 578 - -
Glsi14g1208 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 372 384 IPR008271 GO:0004672|GO:0006468
Glsi14g1208 591 Gene3D Phosphorylase Kinase; domain 1 236 330 - -
Glsi14g1208 591 MobiDBLite consensus disorder prediction 175 220 - -
Glsi14g1208 591 Pfam Protein kinase domain 251 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1208 591 ProSitePatterns Protein kinases ATP-binding region signature. 257 281 IPR017441 GO:0005524
Glsi14g1208 591 Gene3D Transferase(Phosphotransferase) domain 1 331 578 - -
Glsi14g1208 591 SMART serkin_6 251 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1208 591 SUPERFAMILY Protein kinase-like (PK-like) 250 559 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1208 Glsi-ChrGlsi14 13157972 13166365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1208 255 540 MAP Kinase Gene Family AT3G59790 35.354 4.88e-54 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Glsi14g1208 Pkinase 1.6e-63 CL0016