Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1203 ATGCACCATTTTCGTACGTGTCAGATTCTCGGCAGGGACGCGCAGAGCGCGTGGTCAATTGCCTCGGGTAGTGCCAGCTGGCAGTTGGGTCGGCTGACGAGCCTTATCCATTTTCTTATAGCACTGATAACCTCACCTCAAGCTCCCATTTTGTTGGTCACTCTCCTTTCCTATTGGCCACTGTTTCACCCAATAATTACTAGATTGTCATGCCATTTGACCAACTTGTGCTGCGCATGGGTTGGTGACGCTAACTTAATCGGGACTATTACTGTAAAGGTGGTACTGTACGAAACTGGAGATCAGGGCAGAGCAGGAGGATTTAGGGCTTTCGCATCCTGTAAGGCTAGAATATTTGTTACTATGTATGTCTCAGCATTATGATCGTATACAAATCTTTTGGATTTGGCTTCAGGGAATTTCCCAGCAATGGGTAGGGAGTTTAAGGAAAGGAAGCGGATGCCAAGGGTTATGAGTGTTCCTGGGATTATTTCAGAACTTGATGATGATCAGGCACATAGTGTTTCTTCTGATAATCGATCAACTGTTTCTACTGATCGGATTATCATTGTTGCAAACCAGCTTCCTTTGAAAGCAAAGCGAAAAGAGGACAATAAAGGGTGGAGTTTCAGTTGGAATGAAGATTCGTTGCTTTTACAGCTTAAGGATGGATTTCCTGAAGATATGGAGGTTCTTTATGTTGGGTCATTGCGGGTTGATGTTGATCCAGCTGAACAGGATGACGTGTCGCAGTATTTATTGGATAAATTCAAATGTGTCCCTACTTTTCTGCCACCTGATGTTTTGACTAAATTTTATGATGGCTTCTGCAAGAGGCAGTTATGGCCACTGTTTCATTACATGTTACCATTTTCAACAGATAAAAGCCACCATTTTGATCGCTCTTTGTGGGAAGCCTATGTGTTAGCAAATAAGATATTTTTTCAGAAGGTAGTTGAGATAATAAACCCAGAGGATGACTATATTTGGATTCATGATTATCATTTAATGGTGCTTCCATCTTTTATAAGAAGGCGCTTTAACCGGGTTAAATTGGGATTTTTTCTGCATAGCCCCTTTCCATCTTCAGAGATATATAGGACTCTTCCTGTCAGGGAAGAGATACTTAAAGCTTTACTTAACTCTGATATCATTGGTTTCCACACCTTTGACTATGCTCGTCATTTTCTTTCTTGTTGCAGTCGTATGTTGGGTTTGGAGTATCAGTCAAAGAGGGGCTACTTAGGTTTGGAATATTATGGAAGGACTATCAGTATTAAGATTATGCCGGTTGGGGTTCACATGGGTCGAATCAAATCAGTCATGAGAATGGAGGATGAGGAGTGTAAGGCAAAGGAGCTGCATCAGAAATTTGAAGGAAAAACTGTATTGCTTGGTGTTGATGATATGGACATTTTTAAAGGTATAAATTTGAAGATTTTGGCTATGGAGCAGATGCTCAGACAACACCCCAAATGGCAGGGAAGAGCTGTTTTGGTCCAGATAGTAAATCCTGCTAGGGGTAATGGGATACATGTAGAGGGCATACGGGCTGAAATACAAGAAAGCTGCAGCAGGATCAACAGAGTATTTGGGCGGCCTGGTTATGAACCTATTGTTTTTATTGATAGATCAGTTTCAATCGCTGAAAAAGTTGCTTATTATAGCATTGCTGAGTGTGTTGTTGTCACAGCTGTAAGGGATGGGATGAACCTAACTCCTTATGAATATATCGCATGTAGACAGGAAATGTCTGGTTCTGAATCATGCTCCAATGTCAATGGCCCAAAGAAAAGCATGCTAGTAATATCAGAATTTATTGGGTGTTCTCCTTCACTTAGCGGGGCTATCCGTATCAATCCATGGAATGTTGAAACAACTGCAGAGGCAATGAATGAGGCCATCTCAATGGCTGATGGAGAGAAGCAGTTGCGGCATGAAAAACATTATCGTTATGTTAGCACTCATGATGTGGCTTATTGGTCACGTAGTTTCTTGCAAGATATGGAGAGGGCTTGTTTAGACCTTCTGAGGAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGTTTTAGAGTTGTGGCACTTGATCCTAATTTTAGAAAGCTCTCAATTGATGCAATGGTTTCAGCTTACAAGAGGGCAAGGAGTAGGGCCATTTTGTTAGACTATGATGGTACTGTAATGCCACAGCACTCCATTAATAAGAGTCCAAGTCCAGAGGTCATCTCTATTTTGAATAAACTCTGTGCAGACTCCAAAAATGTAGTTTTCATTGTCAGTGGGCGGGGGACGGGTAGCTTAAGTAATTGGTTTACTCCCTGCAAAAAACTTGGAATTGCAGCGGAACATGGGTACTTCTTGAGGTGGTCCCAGAGTGAAGAATGGGAAATTTGTGGTAAGAGCTCCGATTTTAGTTGGATGCAGATTGCTGAACCTGTGATGAAACTATATACAGAGGCAACTGATGGTTCTGGCGTTGAAAAGAAAGAAAGTGCTTTGGTTTGGCAATACCGGGATGCAGACCTTGGTTTTGGATCTTCTCAGGCTAAGGAAATGTTAGATCATCTAGAGAGTGTTTTGGCCAATGAGCCTGTTTCTGTGAAGAGTGGTCAGTTCATTGTTGAAGTAAAGCCCCAGGATGTGAGCAAAGGCTTGGTTGCAGAAAATATATTTTCATCAATGGCTGAGAATGGGAAACAGGCTGACTTTGTGCTGTGTGTTGGTGATGACAGATCAGATGAGGACATGTTTGAAATAATCAGTAGTGCAATCTCAAGAAATATTCTTTCTGCCAATAGCTCTGTATTTGCTTGCACAGTTGGACAAAAACCGAGCAAAGCTAAGTATTATTTGGACGATACGGGTGAAGTCATAACCATGCTAGAATCCTTGGCCGAAGAATCTGATTCTTCGCCTTGCATAAGAGAAACTGGGGATTCCCCTTGA 2946 0.4192 MHHFRTCQILGRDAQSAWSIASGSASWQLGRLTSLIHFLIALITSPQAPILLVTLLSYWPLFHPIITRLSCHLTNLCCAWVGDANLIGTITVKVVLYETGDQGRAGGFRAFASCKARIFVTMYVSALXSYTNLLDLASGNFPAMGREFKERKRMPRVMSVPGIISELDDDQAHSVSSDNRSTVSTDRIIIVANQLPLKAKRKEDNKGWSFSWNEDSLLLQLKDGFPEDMEVLYVGSLRVDVDPAEQDDVSQYLLDKFKCVPTFLPPDVLTKFYDGFCKRQLWPLFHYMLPFSTDKSHHFDRSLWEAYVLANKIFFQKVVEIINPEDDYIWIHDYHLMVLPSFIRRRFNRVKLGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGVHMGRIKSVMRMEDEECKAKELHQKFEGKTVLLGVDDMDIFKGINLKILAMEQMLRQHPKWQGRAVLVQIVNPARGNGIHVEGIRAEIQESCSRINRVFGRPGYEPIVFIDRSVSIAEKVAYYSIAECVVVTAVRDGMNLTPYEYIACRQEMSGSESCSNVNGPKKSMLVISEFIGCSPSLSGAIRINPWNVETTAEAMNEAISMADGEKQLRHEKHYRYVSTHDVAYWSRSFLQDMERACLDLLRKRCWGIGLSFGFRVVALDPNFRKLSIDAMVSAYKRARSRAILLDYDGTVMPQHSINKSPSPEVISILNKLCADSKNVVFIVSGRGTGSLSNWFTPCKKLGIAAEHGYFLRWSQSEEWEICGKSSDFSWMQIAEPVMKLYTEATDGSGVEKKESALVWQYRDADLGFGSSQAKEMLDHLESVLANEPVSVKSGQFIVEVKPQDVSKGLVAENIFSSMAENGKQADFVLCVGDDRSDEDMFEIISSAISRNILSANSSVFACTVGQKPSKAKYYLDDTGEVITMLESLAEESDSSPCIRETGDSP 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1203 981 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 186 673 - -
Glsi14g1203 981 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 846 977 - -
Glsi14g1203 981 Pfam Trehalose-phosphatase 720 953 IPR003337 GO:0003824|GO:0005992
Glsi14g1203 981 NCBIfam HAD-IIB family hydrolase 719 921 IPR006379 -
Glsi14g1203 981 Gene3D Glycogen Phosphorylase B; 441 654 - -
Glsi14g1203 981 Gene3D - 716 829 IPR023214 -
Glsi14g1203 981 Gene3D - 845 973 IPR023214 -
Glsi14g1203 981 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 716 833 - -
Glsi14g1203 981 SUPERFAMILY HAD-like 717 965 IPR036412 -
Glsi14g1203 981 Gene3D Glycogen Phosphorylase B; 179 440 - -
Glsi14g1203 981 Pfam Glycosyltransferase family 20 187 670 IPR001830 GO:0003824|GO:0005992
Glsi14g1203 981 CDD HAD_TPP 718 957 - -
Glsi14g1203 981 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 155 966 IPR001830 GO:0003824|GO:0005992
Glsi14g1203 981 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 180 439 - -
Glsi14g1203 981 FunFam Alpha,alpha-trehalose-phosphate synthase 441 654 - -
Glsi14g1203 981 CDD GT20_TPS 187 670 IPR001830 GO:0003824|GO:0005992
Glsi14g1203 981 NCBIfam trehalose-phosphatase 714 965 IPR003337 GO:0003824|GO:0005992
Glsi14g1203 981 FunFam Trehalose-6-phosphate synthase 2 800 879 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1203 Glsi-ChrGlsi14 13126207 13130985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1203 129 971 Trehalose Biosynthesis Gene Families AT1G06410 77.699 0.0 1371