Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1202 ATGAGCAGCAACTCCAACAATTTCACACCTTTGCCAGGGGCTTGGCGAAATGGTGTTAGAGCCTCTGATACCCACAGTCCCAATAATAGTGGCTACGATGAAGTGTTTTTGTTTTCCCCATCTCTTTCTATCCAAGCCAATCCTGATGACAGGAATTCAAGTGTTCTGGATCCACCACGGTTGATGGAAGATAGATCACCCGGACTCAACAGCATACCCAATTTTTCAGCACAATCACATAGCAGACAACGAATTAGTGTTCTGAACGGGGATATGGGAAGAGGGTTCAACCCCAGGTTCAGAGAGATTGTCCAGCAGTCACCTCCAAGAGCCACAGCAGCAGAAAATTCCAGATCAGCTGCCATGAGAAAGCTTAAGAAAGAAGTGTATGACCCCACCCCAAAGCATTTACCCAAGAGAGTGAGCTTATGTTACAGAGACAGTGTTGTGAATGCTTTAAAAGAGAGGGAAAAGGAGAAGCAAGAAGCTAGCAAGAGGTGCGCTGTTTGCTTGGAAGATTTTGAACCTAAAGAGGAGGTGATGCTCACTCCATGCAAACATTTGTTTCATGAGGATTGCATAGTACCATGGGTGACAAGCCGAGGTCAGTGCCCAATTTGTAGGTTTGTAATTTGTGAGAAGGTGAGGGAGAACCCGTCATCCTTCAACAACCGTAACTTAGCCAATATGGTACCCAGTGATATTCTAATTGCAGGAGAGCTTCTATCAATTTTCAGGGCCATGCAAGAATCTTTCCAATTGGGCAATGGAACTCACTAA 780 0.4513 MSSNSNNFTPLPGAWRNGVRASDTHSPNNSGYDEVFLFSPSLSIQANPDDRNSSVLDPPRLMEDRSPGLNSIPNFSAQSHSRQRISVLNGDMGRGFNPRFREIVQQSPPRATAAENSRSAAMRKLKKEVYDPTPKHLPKRVSLCYRDSVVNALKEREKEKQEASKRCAVCLEDFEPKEEVMLTPCKHLFHEDCIVPWVTSRGQCPICRFVICEKVRENPSSFNNRNLANMVPSDILIAGELLSIFRAMQESFQLGNGTH 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1202 259 SMART ring_2 167 207 IPR001841 -
Glsi14g1202 259 FunFam RING/U-box superfamily protein 151 226 - -
Glsi14g1202 259 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 151 224 IPR013083 -
Glsi14g1202 259 ProSiteProfiles Zinc finger RING-type profile. 167 208 IPR001841 -
Glsi14g1202 259 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 75 209 - -
Glsi14g1202 259 MobiDBLite consensus disorder prediction 1 27 - -
Glsi14g1202 259 SUPERFAMILY RING/U-box 157 217 - -
Glsi14g1202 259 Coils Coil 146 166 - -
Glsi14g1202 259 Pfam Ring finger domain 166 208 IPR001841 -
Glsi14g1202 259 MobiDBLite consensus disorder prediction 43 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1202 Glsi-ChrGlsi14 13124254 13125589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1202 52 256 C3H Transcription Factor Family AT3G58720 38.249 2.38e-42 143