Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1189 ATGTCTGAATTAGACGCTCAGATTCAAACTGCCTTTGATCCGTTTGCCGACGCAAATGCTGAGGACTCAGGGGCTGGGACAAAGGACTATGTGCATATTCGCATTCAGCAAAGGAATGGTAGAAAAAGCCTGACAACTGTCCAGGGACTGAAGAAAGAATTCAGCTATAACAAAATACTTAAAGACCTCAAGAAAGAGTTCTGCTGCAATGGTACAGTTGTCCAGGACCCAGAACTAGGACAGGTTATTCAACTTCAAGGTGATCAGCGAAAGAATGCATCTACCTTCCTAATCCAGGCTGGTATTTTGAAGAAGGAGCATATCAAGATTCATGGTTTCTGA 342 0.4327 MSELDAQIQTAFDPFADANAEDSGAGTKDYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNASTFLIQAGILKKEHIKIHGF 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1189 113 SUPERFAMILY eIF1-like 5 113 IPR036877 GO:0003743|GO:0006413
Glsi14g1189 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Glsi14g1189 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Glsi14g1189 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 8 113 - -
Glsi14g1189 113 NCBIfam translation initiation factor SUI1 7 113 IPR005874 GO:0003743
Glsi14g1189 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Glsi14g1189 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Glsi14g1189 113 Gene3D - 1 113 - -
Glsi14g1189 113 FunFam Eukaryotic translation initiation factor SUI1 2 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1189 Glsi-ChrGlsi14 13028167 13029830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1189 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 87.611 8.55e-74 213