Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1164 ATGGACTCCCAGCAGATTTTCGGTTTCGGTGTGACTGGTGCAAGGGTACAATACAAATCATCTCATCCCACTATTCCATCACTACCTGACAGGCTGCTTGGATCCTTGAAATTTGACATAGGAAACTCACCTAATTCACCCTTCTCTACTCATTTTGATTCTGATTCTCTTTCTACACTTAGTGACAGCCAAGAACTGTGCTGCTCTGGGGAGATCCTCTCTGGTGTCAGCCCTTCTAACTATTCACCAGAAACTAATTATTACTTAAAGAGGTCAATCTCACCTTTGGACCATCTCCAAGATAGTCTGCATCTATATTCTGCTAGGAGCTCTTTTGTGCAGGATGCTAATTGTAGCCAGAAAATCAAGCACGCATTGCTGGAATTAGAGAATGTTCTGATGGCCCCTGATGACGGTGATGAAGTTACCACATCAAATAGTGAGAGTAGCAGGCCAACAACATCTGGCCAAAGATACAGGTCTTCGAGCCATGAGCGCCAGGGGACACAATATGTTCAAAGTCAGCCGTCTTTTGTTACTAATAGTAGGCAGTCAAGTGAGGTTGGTCATAAAGAGAAACGTCACAAGCCAATGGAGGAAGCACGTCTACAAGGCTTCCCACCAAGCAATTTAAAACAATTGCTGATTGCATGTGCCAAAGCCCTCTCTGAAAACAACATAAAAGATTTTGATCAGTTGATTGAGAAGGCTAGAAATGATGTGTCTATTACTGGGGAGCCAATCCAACGGCTTGGTGCTTATATGGTAGAAGGGCTTGTTGCACGGAAGCAGACATCAGGGAATAACATCTATCATACCCTTAGGTGCAGAGAGCCTGAGGGCAAAGACTTGTTCTCGTACATGCACATGCTGTACGAGATTTGCCCCTACTTAAAATTTGGTTACATGGCTGCCAATGGAGCCATTGCTGAAGCGTGCAGAAACGAGGACCGCATTCACATCATAGACTTTCAGATTGCTCAGGGAACTCAATGGGTGACTCTCCTTCAAGCTCTTGCAGCAAGGCCTGGTGGGGCTCCCTCTGTTCGGATCACGGGAATTGATGATCCTGTTTCTAAATATGCCCGTGGTGATGGATTGGAGGCAGTTGGGAAACGGTTGGCCATAATCTCGGAGAAATTTGGTATACCAGTTGAGTTTCATGGAGTGCCTGTTTTTGCTCCATACGTAACGAAAGACATGCTTGATGTCAGGCCTGGAGAGGCTTTGGCTGTTAACTTTCCCCTGCATCTCCATCACACGGCTGACGAGAGTGTTGATGTGAACAACCCAAGGGATGGACTTCTGAGAATGGTAAAGTCACTTTCTCCCAAGGTGACCACATTGGTTGAACAGGAATCGAACACAAACACAACTCCTTTCTTCAACAGGTTTCTAGAAGCCTTAGATTACTACTTAGCAATGTTCGAGTCTATTGATGTCACCCTCCCAAGGAATAGCAAGGAGCGGATTAACGTGGAGCAACATTGTTTGGCTCGGGATATCGTGAACGTTATTGCCTGTGAAGGGAAGGAAAGGATAGAGAGACACGAACTGTTTGGCAAGTGGAAGTCAAGGTTGACAATGGCTGGCTTCCGCCAATATCCATTGAGATCTGACGTAAATTCTGTGATTAGAATCCTGCTGAGGTGCTATTCAGAGCATTATACACTAGAGGAGAAGGATGGGGCTATGTTGTTGGGGTGGAAAAACAGAAATTTGATATCAGCCTCAGCCTGGCATTGA 1746 0.4548 MDSQQIFGFGVTGARVQYKSSHPTIPSLPDRLLGSLKFDIGNSPNSPFSTHFDSDSLSTLSDSQELCCSGEILSGVSPSNYSPETNYYLKRSISPLDHLQDSLHLYSARSSFVQDANCSQKIKHALLELENVLMAPDDGDEVTTSNSESSRPTTSGQRYRSSSHERQGTQYVQSQPSFVTNSRQSSEVGHKEKRHKPMEEARLQGFPPSNLKQLLIACAKALSENNIKDFDQLIEKARNDVSITGEPIQRLGAYMVEGLVARKQTSGNNIYHTLRCREPEGKDLFSYMHMLYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGTQWVTLLQALAARPGGAPSVRITGIDDPVSKYARGDGLEAVGKRLAIISEKFGIPVEFHGVPVFAPYVTKDMLDVRPGEALAVNFPLHLHHTADESVDVNNPRDGLLRMVKSLSPKVTTLVEQESNTNTTPFFNRFLEALDYYLAMFESIDVTLPRNSKERINVEQHCLARDIVNVIACEGKERIERHELFGKWKSRLTMAGFRQYPLRSDVNSVIRILLRCYSEHYTLEEKDGAMLLGWKNRNLISASAWH 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1164 581 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 167 577 IPR005202 -
Glsi14g1164 581 Coils Coil 220 240 - -
Glsi14g1164 581 MobiDBLite consensus disorder prediction 186 201 - -
Glsi14g1164 581 MobiDBLite consensus disorder prediction 137 204 - -
Glsi14g1164 581 Pfam GRAS domain family 211 580 IPR005202 -
Glsi14g1164 581 ProSiteProfiles GRAS family profile. 202 581 IPR005202 -
Glsi14g1164 581 MobiDBLite consensus disorder prediction 140 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1164 Glsi-ChrGlsi14 12854835 12856580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1164 106 580 GRAS Transcription Factor Family AT5G48150 53.306 6.31e-175 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi14g1164 GRAS 9.7e-129 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1164 14 12854835 12856580 Glsi04g0920 04 7334661 7336424 CCT
Glsi14g1164 14 12854835 12856580 Glsi14g1164 14 12854835 12856580 ECH