Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1150 ATGGGAATTCTTCGTTTCATGGGTATCCTTTCGTATGTACTTCTTGTCCCTGCTCTTAAAGGTTCCATGGCAGCTAATTCCATACGCCAGTCCAAATCCTTAAGTGACGGCATGATACTAATTTCCGGAGATTCACAACATGAGGGCAGGAAGAAGCTGAAAGTGGTACTGGTCACCACTATTGGTGCTGTTTTTGGAATGCTTTTAGCTGGGTGCTTTTATATCAAAAGAGTGCGCAGAAAAATGACCGCTAAATCGTTTTCCATTATACCAGAGAAATCAAAAACTTTAGGAGATCAAAGGAGTGAAGGACAAGGGAAAGACCTGGATCTCCCGTTGCTTGAGATGTCAACATTAGCCCTGGCCACTGATAACTTCTCAACGAACAACAAGATTGGAGAAGGTGGCTTTGGACCTGTATACAAGGGAAGACTGGAACATGGGCTAGAAATTGCTGTGAAGAGGCTTTCAAGAAGTTCAGGACAAGGGATAACTGAGTTCAAGAATGAAGTAAAACTGATTGCAAAACTTCAGCACCGGAATCTCGTAAAGCTTCTTGGTTGTTGCATTCAGGGACAAGAGAAAATGCTAATTTATGAATACATGCCTAATGGCAGCCTGGACTCCTTCATATTTGATAACCACAAAGGGAAAGTGCTAGATTGGTCTAAGCGCATTCACATTATCTGTGGGATTGCTCGAGGCCTTCTATATCTTCATCAAGATTCTAGATTGAGGATTATTCATAGAGATTTAAAAGCAAGTAATGTTTTACTAGACGACGAGTTGAATCCAAAAATATCAGACTTTGGAATGGCTAAAATTTTTGGAGGAGACCAAACTGAAGGAAGCACAAACAGAGTAGTAGGAACTTATGGATACATGTCACCAGAATACGCTGCTGATGGGCTATTTTCAATTAAATCTGATGTGTTTAGTTTCGGTGTTTTGTTGTTGGAGATTATAACTGGCAAGAGAAATAGAGGTTATTATCATACAGACCTTACACATAACCTTATTGCTCGTGCATGGGTACAGTGGAAAGAAGGGAGGGTTCTAGAATTGATTGACAAAAACATAGAGGAATCATGTAGTTTATCAGAAGTTGTGCGTTGTATCCGGATCAGTCTCTTGTGTGTTCAACAATATCCAGAGGATAGACCTACCATGTCATCAGTGGTTCTAATGTTGGGAAGTAAGACTGAATTGGCAGAGCCTAAACAACCTGGTTTCTACGAGAGAAAGCTATCAATTGAAGCAAATTCCTCCTCAAGTCAGCTAGAATCTGGATCGACTAATGAAATAACAATCTCTCAACTAATTGCAAGATAA 1332 0.4024 MGILRFMGILSYVLLVPALKGSMAANSIRQSKSLSDGMILISGDSQHEGRKKLKVVLVTTIGAVFGMLLAGCFYIKRVRRKMTAKSFSIIPEKSKTLGDQRSEGQGKDLDLPLLEMSTLALATDNFSTNNKIGEGGFGPVYKGRLEHGLEIAVKRLSRSSGQGITEFKNEVKLIAKLQHRNLVKLLGCCIQGQEKMLIYEYMPNGSLDSFIFDNHKGKVLDWSKRIHIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDDELNPKISDFGMAKIFGGDQTEGSTNRVVGTYGYMSPEYAADGLFSIKSDVFSFGVLLLEIITGKRNRGYYHTDLTHNLIARAWVQWKEGRVLELIDKNIEESCSLSEVVRCIRISLLCVQQYPEDRPTMSSVVLMLGSKTELAEPKQPGFYERKLSIEANSSSSQLESGSTNEITISQLIAR 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1150 443 Pfam Protein tyrosine and serine/threonine kinase 128 395 IPR001245 GO:0004672|GO:0006468
Glsi14g1150 443 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 202 405 - -
Glsi14g1150 443 Gene3D Phosphorylase Kinase; domain 1 92 201 - -
Glsi14g1150 443 SMART serkin_6 126 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1150 443 Gene3D Transferase(Phosphotransferase) domain 1 202 413 - -
Glsi14g1150 443 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 92 201 - -
Glsi14g1150 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Glsi14g1150 443 Pfam Domain of unknown function (DUF3403) 400 443 IPR021820 GO:0004674
Glsi14g1150 443 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 31 440 - -
Glsi14g1150 443 SUPERFAMILY Protein kinase-like (PK-like) 113 399 IPR011009 -
Glsi14g1150 443 CDD STKc_IRAK 132 397 - -
Glsi14g1150 443 ProSiteProfiles Protein kinase domain profile. 126 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1150 Glsi-ChrGlsi14 12507380 12510571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1150 53 411 Receptor kinase-like Gene Family AT4G23230 54.972 3.08e-135 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi14g1150 PK_Tyr_Ser-Thr 3.9e-53 CL0016