Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1148 ATGACTGATAAATCAAAAAATAAAGAAGATAAAAAAAATGAAGGATCAGAGGATGATCTAGACCTTACATTGCTTGACCTGCCAACAATAGCTACTGCCACCAATAACTTCTCACCGGATAACAAAATTGGACAAGGTGGATTTGGACCTGTATACAAGGGAAAGTTAGAAAATGGAAAAGAAATTGCCGTGAAGAGGCTTTCAATGAGTTCAAGGCAAGGATTGACTGAGTTCAAGAATGAAGTAAAACTTATTGTAAAACTTCAGCACCGAAATCTTGTGAAACTTCTTGGCTGTTGTATTCATGGACAAGAAAAAATGCTGATTTATGAATACATGCCGAACAGCAGCTTGGACTCCTTCATTTTTGATCATACTCAAAGTAAGTTGCTGGATTGGTCTAAGCGCTACGACATTATTTGTGGCATTGCACGAGGTCTATTATATCTACATCAAGATTCCAGATTGAGAATTATTCATAGGGATCTGAAAGCAAGTAATGTTTTATTGGATAATAAGTTAAACCCAAAAATATCAGATTTTGGCATGGCTAAAACTTTTGGAGAAGAGCAGATAGAAGGGAACACAACAAGAGTAGTGGGAACCTTTGGTTACATGGCACCTGAATACGTTGCAGATGGGCAATTTTCTGTAAAATCCGATGTCTTCAGTTTTGGTATTTTGGTGCTTGAAATTATATATGGCAAGAGAAATAAAGGATTTTATTATGTAGACCAAAGTCACAACCTTATTGGTCATGTAAGTATCTGA 771 0.3619 MTDKSKNKEDKKNEGSEDDLDLTLLDLPTIATATNNFSPDNKIGQGGFGPVYKGKLENGKEIAVKRLSMSSRQGLTEFKNEVKLIVKLQHRNLVKLLGCCIHGQEKMLIYEYMPNSSLDSFIFDHTQSKLLDWSKRYDIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDNKLNPKISDFGMAKTFGEEQIEGNTTRVVGTFGYMAPEYVADGQFSVKSDVFSFGILVLEIIYGKRNKGFYYVDQSHNLIGHVSI 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1148 256 FunFam Lectin-domain containing receptor kinase A4.3 113 255 - -
Glsi14g1148 256 Gene3D Transferase(Phosphotransferase) domain 1 113 255 - -
Glsi14g1148 256 SUPERFAMILY Protein kinase-like (PK-like) 24 238 IPR011009 -
Glsi14g1148 256 SMART serkin_6 37 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1148 256 Gene3D Phosphorylase Kinase; domain 1 1 112 - -
Glsi14g1148 256 Pfam Protein tyrosine and serine/threonine kinase 40 236 IPR001245 GO:0004672|GO:0006468
Glsi14g1148 256 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Glsi14g1148 256 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 112 - -
Glsi14g1148 256 ProSiteProfiles Protein kinase domain profile. 37 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1148 256 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1148 Glsi-ChrGlsi14 12465625 12466791 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1148 4 254 Receptor kinase-like Gene Family AT4G23230 62.055 8.01e-109 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi14g1148 PK_Tyr_Ser-Thr 1.3e-49 CL0016