Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1147 ATGGACGTTCTTTCTTTCTTGAGTATTTTTGCTTCTTTTCTTCTCCCCATCCCCAAGCTTTCCATAGCAGTTGATTCCATTCGTCAGTCCCAGTCCATCAGGGATGATGGCACCACCTTGGTTTCCAAAGGTGGAACCTTTGAACTTGGTTTCTTCACTCCTGGAACTTCCAACAAACGTTACCTGGGCATCTGGTACAAAAACATCCCAGTTCAAACCGTTGTTTGGGTTGCCAACCGCCTCAACCCAATCAACGATTCCTCTGGTATCTTAACAATGAACAGCACCGGCAATCTAGTCCTCAGTCAAAATGACACTCTTGTTTGGTATATAAGTTTGACGGCACAAGCACAGAATCCAATGACCCAGCTCTTGGATTCTGGGAATCTTGTGGTGCTAGATGAGAAAGAAGCAAACCCAGAAGCCTATTTGTGGCAAAGCTTTGATTATCCATCTGATACGTTGTTGCCAGGGATGAAATTTGGATGGGACCTAGGAACAGGTCTGAATAGGCGTCTAACTGCATGGAAGAGTCCTGACGATCCAGCTCCGGGAGACTTCACTAACGATGTAGTGCTCAATAGCTATCCTGATTCATATTTGAAGAAGGGAACCAAAAAGTACTACCGATTTGGACCGTGGAATGGCTTGCATGCTAGTGGTTCTCCAGAAGTAAAGCCCAACCCTCTTTTTCAGTATACTTTTGTCTCCAATAAGGACGAGTTCTACTACATGTTCCATCTCCAGAATAATTCTATTCTCTCAAGATTGGTAATGAACCAAAGTGATAATGCTCGTTATCGCTATGTATGGGTGGAAAATGATCAAAATTGGATGATTTATTCCACAAAGCCAGTGGACAACTGCGACAATTATGGCCTTTGTGGAGCAAATGGAGATTGTATCATTACTGAATCACCTGTCTGCCAGTGTTTGAAAGGCTTCACGCCTAAGTCACCACAACATTGGAACGCAGTGGACTGGTCTGATGGATGTGTCCGCAAAAAACCACTAAACTGCACTGAAAAACACAAGGACGGATTTATGAAATTGGTGGGGGTGAAAGTCCCAGATACTACACAAACTTGGCTTGATGAGACAATGAATCTAGAGCAATGCAGGGAGAAGTGCTTGAATAATTGCTCTTGTATGGCCTATACTAATTCAGATGTGAGAGGGGCAGGTAGTGGCTGTGTCATGTGGTTTAACGAACTAACTGATATCAGAAGTTATGCGTCTGGAGGGCAGGATCTATATGTTCGAATGGATGCTTCAGAATTAGAATCTCGGCATATAAAGAAGCTGATAATGATCGTCACTATCCCTATTGCTGCGATTTTGGGGACGCTTTTAGCTGGGTGCTATTTCGTCTACAGAGTCCGCAGAAAGATGAGAGGGAAATCAAAAAATAAAGATCAAATTCAACATAATGAAGGATCAAAGAATGATCTTGATCTCCCATTGTTTGACCTGTCAGTGATAGCAAGTGCCACTAGTAACTTCTCAGAGAATAACAAAATCGGAGAAGGTGGATTTGGACCTGTCTACAAGGAACAAGAAAAGATGTTGGTATATGAATACATGCCAAACAGCAGCTTGAACTCCTTCATTTATGATGATACCAAGGAGAAGTTGCTAGATTGGTCTCAACGCTTCCACATTATTATGGGAATTGCTCGGGGTCTAATGTATCTTCATCAAGATTCCAGACTAAGAATTATCCATAGAGATCTAAAAGCAAGTAATGTTTTACTAGATAACAAGTTGAACCCAAAAATATCAGATTTTGGATTGGCTAAAACTTTTGGAGAAGAGCAGATAGAAGGCAATACAAATAGAGTAGTGGGAACTTATGGCTACATGGCACCAGAATATGCTGCTGATGGGACATATTCTGTGAAATCTGATATCTTTAGTTATGGTATATTGATGTTGGAGATTATATGTGGGAAGAAAAATAGAGGGTTTTATCTTGAAGACCACAAGCAGAGCCTTATTGGTCATGTCAGTACTTGA 2016 0.4157 MDVLSFLSIFASFLLPIPKLSIAVDSIRQSQSIRDDGTTLVSKGGTFELGFFTPGTSNKRYLGIWYKNIPVQTVVWVANRLNPINDSSGILTMNSTGNLVLSQNDTLVWYISLTAQAQNPMTQLLDSGNLVVLDEKEANPEAYLWQSFDYPSDTLLPGMKFGWDLGTGLNRRLTAWKSPDDPAPGDFTNDVVLNSYPDSYLKKGTKKYYRFGPWNGLHASGSPEVKPNPLFQYTFVSNKDEFYYMFHLQNNSILSRLVMNQSDNARYRYVWVENDQNWMIYSTKPVDNCDNYGLCGANGDCIITESPVCQCLKGFTPKSPQHWNAVDWSDGCVRKKPLNCTEKHKDGFMKLVGVKVPDTTQTWLDETMNLEQCREKCLNNCSCMAYTNSDVRGAGSGCVMWFNELTDIRSYASGGQDLYVRMDASELESRHIKKLIMIVTIPIAAILGTLLAGCYFVYRVRRKMRGKSKNKDQIQHNEGSKNDLDLPLFDLSVIASATSNFSENNKIGEGGFGPVYKEQEKMLVYEYMPNSSLNSFIYDDTKEKLLDWSQRFHIIMGIARGLMYLHQDSRLRIIHRDLKASNVLLDNKLNPKISDFGLAKTFGEEQIEGNTNRVVGTYGYMAPEYAADGTYSVKSDIFSYGILMLEIICGKKNRGFYLEDHKQSLIGHVST 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1147 671 SMART blect_4 31 151 IPR001480 -
Glsi14g1147 671 SMART serkin_6 501 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1147 671 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 148 - -
Glsi14g1147 671 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Glsi14g1147 671 CDD EGF_CA 286 319 - -
Glsi14g1147 671 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Glsi14g1147 671 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 182 IPR036426 -
Glsi14g1147 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 573 585 IPR008271 GO:0004672|GO:0006468
Glsi14g1147 671 ProSiteProfiles Protein kinase domain profile. 386 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1147 671 Gene3D - 20 148 IPR036426 -
Glsi14g1147 671 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Glsi14g1147 671 Pfam D-mannose binding lectin 73 177 IPR001480 -
Glsi14g1147 671 CDD PAN_AP_plant 337 421 - -
Glsi14g1147 671 Pfam PAN-like domain 340 408 IPR003609 -
Glsi14g1147 671 Pfam Protein kinase domain 516 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1147 671 FunFam Lectin-domain containing receptor kinase A4.3 528 671 - -
Glsi14g1147 671 Pfam S-locus glycoprotein domain 209 319 IPR000858 GO:0048544
Glsi14g1147 671 SMART ntp_6 343 422 IPR003609 -
Glsi14g1147 671 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 654 - -
Glsi14g1147 671 Gene3D Transferase(Phosphotransferase) domain 1 528 671 - -
Glsi14g1147 671 SUPERFAMILY Protein kinase-like (PK-like) 485 653 IPR011009 -
Glsi14g1147 671 CDD B_lectin 36 151 IPR001480 -
Glsi14g1147 671 Gene3D Phosphorylase Kinase; domain 1 459 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1147 Glsi-ChrGlsi14 12362992 12366150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1147 435 669 Receptor kinase-like Gene Family AT4G23230 44.366 7.21e-69 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi14g1147 Pkinase 4.3e-32 CL0016