Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1145 ATGCAGGGAAGATTATTGAATGGCCAAGAAATTGCTGTGAAGAGGCTTTCAAGAAGATCAAGACAAGGAATGACTGAGTTCAAGAATGAAGTCAAAGTTATTGCAAAACTTCAGCATCGAAATCTTGTGAAACTTCTTGGCTGTTGCATTCAGGGACAAGAAAAGATGTTGGTATATGAATACATGCCAAACAGCAGCTTGAACTCCTTCATTTATGATGATGCCAAGAGAAAGTTGTTAGATTGGTCTCAGCGCTTCCACGTTATTATGGGAATTGCTCGGGGTCTAATGTATCTTCATCAAGATTCCAGACTAAGAATTATTCATAGAGATTTAAAAGCAAGTAATATTTTATTAGATGACAAGTTAAACCCAAAAATATCAGATTTTGGATTGGCTAAAACTTTTGGAGAAGAGCAGACAGAAGGCAATACAAATAGAGTAATGGGAACTTATGGCTACATGGCACCAGAATATGCTGCAGATGGTCTATATTCTGTGAAATCTGATATCTTTAGTTATGGTATATTAATATTGGAGATCATATGTGGGAAGAGAAATAGAGGGTTTTATCTTGAAGACCACAAGCATAATCTTATTGGCCATGCATGGATACTGTGGAAAGAAGGAAGGGCTTTAGAATTGATTGACAAAAACATAGAGGAATTGTGCATTTTATCAGAAGTATTGCGGTGCATTCAGGTTAGTCTATTGTGTGTGCAACAACATCCAGAGGATAGACCCACCATAGCAACCGCGGTTTTGATGTTGGAAAGTGATATTGAACTGCCTCAGCCTAAACGGCCAGGTTTCTTTCAAGACAAGGGTCCATTTGAACCACACTCTTCCTCCTCAAGTCAGAAGCAATCTTACTCAACCAGTGAAATTACCTTGACCAAACTACAAGCCCGATGA 915 0.3847 MQGRLLNGQEIAVKRLSRRSRQGMTEFKNEVKVIAKLQHRNLVKLLGCCIQGQEKMLVYEYMPNSSLNSFIYDDAKRKLLDWSQRFHVIMGIARGLMYLHQDSRLRIIHRDLKASNILLDDKLNPKISDFGLAKTFGEEQTEGNTNRVMGTYGYMAPEYAADGLYSVKSDIFSYGILILEIICGKRNRGFYLEDHKHNLIGHAWILWKEGRALELIDKNIEELCILSEVLRCIQVSLLCVQQHPEDRPTIATAVLMLESDIELPQPKRPGFFQDKGPFEPHSSSSSQKQSYSTSEITLTKLQAR 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1145 304 Gene3D Transferase(Phosphotransferase) domain 1 62 266 - -
Glsi14g1145 304 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 303 - -
Glsi14g1145 304 ProSiteProfiles Protein kinase domain profile. 1 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1145 304 Pfam Protein tyrosine and serine/threonine kinase 8 253 IPR001245 GO:0004672|GO:0006468
Glsi14g1145 304 SUPERFAMILY Protein kinase-like (PK-like) 5 278 IPR011009 -
Glsi14g1145 304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 107 119 IPR008271 GO:0004672|GO:0006468
Glsi14g1145 304 MobiDBLite consensus disorder prediction 278 304 - -
Glsi14g1145 304 SMART serkin_6 1 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1145 304 Pfam Domain of unknown function (DUF3403) 261 304 IPR021820 GO:0004674
Glsi14g1145 304 MobiDBLite consensus disorder prediction 265 304 - -
Glsi14g1145 304 PIRSF TyrPK_CSF1-R 231 301 - -
Glsi14g1145 304 PIRSF TyrPK_CSF1-R 62 186 - -
Glsi14g1145 304 PIRSF TyrPK_CSF1-R 7 79 - -
Glsi14g1145 304 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 62 265 - -
Glsi14g1145 304 FunFam Uncharacterized protein 1 61 - -
Glsi14g1145 304 Gene3D Phosphorylase Kinase; domain 1 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1145 Glsi-ChrGlsi14 12338274 12339490 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1145 2 271 Receptor kinase-like Gene Family AT4G23230 60.886 6.52e-121 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi14g1145 PK_Tyr_Ser-Thr 6.9e-46 CL0016