Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1137 ATGGCAACAATAGTAACTATTTCTGTAGCTATAGTTTCTGGTGCGCTTGTGTTGGGGTGGTGTTATACACAGAAAGTAGGCAAAAACATGAAAGACTGCAGTAATAAGGGAGATCAGAACAATGAGAGCCAAGTGGATGATATGGATCTGCCATTCTTTGACCTGTTATCAGTAGCTGCTGCCACTAGCAACTTTTCAATCGACAACAAAATTGGAGAAGGTGGTTTTGGACCTGTATACAGGGGAACATTGGCAAATGGGATAGAAATTGCTGTGAAGAGGCTCTCTGCAAACTCAGGACAAGGATTAACCGAGTTCAAGAATGAAGTTAAACTGATTGCAAAACTTCAACATCGCAATCTTGTAAAGCTCCTTGGTTGCTGCATTCAAGGGGAGGAGACAATGCTGGTGTATGAATATATGTCTAACGGTAGCCTGGACTCGTTTATTTTTGATCAAAATAAAAGTAAATTACTAGATTGGTCGAAACGCTTTCAAATTGTTGTCGGAATTGCTCGAGGACTTATCTATCTTCACCAGGATTCTAGACTAAGGATTATTCATAGAGATCTCAAGGCAAGTAATGTTTTACTTGATAATGAGCTGAACCCAAAAATTTCAGATTTTGGCATGGCTAGAATTTTTGGAGGAGACCAAAATGAAGTAAACACAAAGAGAATAGTTGGGACTTATGGTTATATGGCACCGGAATATGCAACCGATGGATTATTTTCAGTAAAATCTGATGTTTTTAGTTTTGGTGTTTTGGTGTTGGAGATTATATCTGGGAAGAGAAGCAGAGGATATTATAATCCAAATCACAGCCTTAATCTTATTGGTCATGCATGGAAATGAATGATGAAGCATTTGGATACGCAATATGATGGCGTTAGACCAATTTTGGAGATATTCTACCACCAAGTAAAGAGGAAGGAGACGGAAGAGATAGATGTGAAAGGAAGAGGACGCAGTTTTCTGAGAAAAGAGATCGACGCAGACGATTCCGCCTTAAAAGTTGGTGAAAAGAAAGTCAATATGAAAATTGATTTCAGGACGAACAGACAAACACACAGACAGAAAGCACAAAGACCTTGCAGGACTTCATCAATGGCTGTCAAAGTTTATATTGTATACTACTCAATGTATGGACATGTGGAGAAACTAGCAGAAGAAATAAAGAAAGGGGCTGCATCTGTAGAAGGTGTTGAGGCCAAACTATGGCAGGTACCTGAGACACTGCCAGATGAGGTGCTTGGAAAGATGGGTGCGCCACCCAAGAGTGATGTACCAATCCTTACACCCAATGAACTTGCTGAGGCTGATGGTTTTATTTTTGGCTTCCCAACAAGATTTGGAATGATGGCTGCTCAATTCAAAGCTTTTTTAGATGCAACTGGAGGTTTATGGAGAGCACAACAGCTTGCAGGCAAGCCTGCTGGAATCTTCTACAGCACCGGATCTCAAGGTGGTGGACAAGAGACTACAGCGCTGACTGCTATAACTCAACTGGTTCATCATGGGATGATATTTGTTCCAATTGGATATACATTCGGCGCTGGCATGTTCGAGATGGAGCAAGTGAAAGGTGGAAGTCCATATGGTGCAGGAACTTACGCTGGTGATGGCTCAAGACAACCATCTGAGCTCGAGTTGGAGCAAGCATTCCACCAGGGGAAGTATATTGCCACCATCACAAAGAAGCTCAAGGGAGCTGCATAA 1719 0.4159 MATIVTISVAIVSGALVLGWCYTQKVGKNMKDCSNKGDQNNESQVDDMDLPFFDLLSVAAATSNFSIDNKIGEGGFGPVYRGTLANGIEIAVKRLSANSGQGLTEFKNEVKLIAKLQHRNLVKLLGCCIQGEETMLVYEYMSNGSLDSFIFDQNKSKLLDWSKRFQIVVGIARGLIYLHQDSRLRIIHRDLKASNVLLDNELNPKISDFGMARIFGGDQNEVNTKRIVGTYGYMAPEYATDGLFSVKSDVFSFGVLVLEIISGKRSRGYYNPNHSLNLIGHAWKXMMKHLDTQYDGVRPILEIFYHQVKRKETEEIDVKGRGRSFLRKEIDADDSALKVGEKKVNMKIDFRTNRQTHRQKAQRPCRTSSMAVKVYIVYYSMYGHVEKLAEEIKKGAASVEGVEAKLWQVPETLPDEVLGKMGAPPKSDVPILTPNELAEADGFIFGFPTRFGMMAAQFKAFLDATGGLWRAQQLAGKPAGIFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEQVKGGSPYGAGTYAGDGSRQPSELELEQAFHQGKYIATITKKLKGAA 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1137 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Glsi14g1137 572 SMART serkin_6 65 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1137 572 ProSiteProfiles Protein kinase domain profile. 65 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1137 572 FunFam NAD(P)H dehydrogenase (Quinone) FQR1-like 370 570 - -
Glsi14g1137 572 Pfam Protein tyrosine and serine/threonine kinase 66 277 IPR001245 GO:0004672|GO:0006468
Glsi14g1137 572 SUPERFAMILY Protein kinase-like (PK-like) 48 286 IPR011009 -
Glsi14g1137 572 Pfam NADPH-dependent FMN reductase 386 513 IPR005025 GO:0016491
Glsi14g1137 572 ProSiteProfiles Flavodoxin-like domain profile. 374 561 IPR008254 GO:0010181
Glsi14g1137 572 Gene3D Transferase(Phosphotransferase) domain 1 141 322 - -
Glsi14g1137 572 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 141 307 - -
Glsi14g1137 572 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 288 - -
Glsi14g1137 572 Gene3D - 369 570 IPR029039 -
Glsi14g1137 572 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 29 140 - -
Glsi14g1137 572 CDD STKc_IRAK 71 291 - -
Glsi14g1137 572 NCBIfam NAD(P)H:quinone oxidoreductase, type IV 372 568 IPR010089 GO:0003955|GO:0010181
Glsi14g1137 572 SUPERFAMILY Flavoproteins 373 569 IPR029039 -
Glsi14g1137 572 Gene3D Phosphorylase Kinase; domain 1 24 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1137 Glsi-ChrGlsi14 12287255 12297127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1137 4 301 Receptor kinase-like Gene Family AT4G23230 56.667 6.94e-107 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi14g1137 PK_Tyr_Ser-Thr 6.1e-52 CL0016