Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1135 ATGGCCATTCTTCCTTTTATGCCAGTTATCATCAAACTGCTTTTGTTCTTGTCTCGATTTTCCTCTGCAACTGATATCATTACTCGCTTTCAGCCACTTGTTGATGGTAAGACCTTGGTTTCCATTGATGGAAGCTTTGAATTGGGTTTCTTCAGTCCAGGGAGTTCCAAAAACCGCTACGTCGGACTCTGGTACAAAAATATCCCACTTAGAACTGTTGTTTGGGTTGCCAACCGCGACAACCCAAGCAAAGACAACTCCAGCATGTTGACCATAAACACAGAGGGAAAACTTGTGCTTCTCAGCCAGAACAACACAGTTCTTTGGTCAGCAAACTCAACCGCAAGGGCGTCGAGTCCCATTGTGCAGCTCCTGGATTCTGGGAACCTAGTACTAAGAGATGATGACAATAATCCTCAAAACTACTTGTGGCAGAGCTTCGACTATCCTTCTGATACACTGCTACCCGGAATGAAGTTCGGATGGGACCTAAGAAAAGATCTCAATCGGCGTCTAACTGCGTGGAAGAATTGGGATGACCCATCGCCAGGTGACTTCACGTGGAGTTTCATTCTCAGCAACAACCCTGAAATGGTGTTGTGGAAGGGTTCGACAGAGTACTCCAGGGGTGGCCCCTGGAATGGCATTCAATTCAGTTCTGCGTCATCTTTGAAGTATAATCCAATGTTCGATTTCAAGTTTGTGTTCAATAAGGATGAGTTGTATTACACCTACAGCATCAAGAATAAGTCAGTGATTTCAAGACTTGTTATGAATCAAACCAATTATGCTCGTCAGCGCTACACGTGGATAGAAGAAGCTAAAGCTTGGAGGATGTATTCATCTTGGCCACAAGACTACTGTGACAAGTATAATGTTTGTGGCCCATATGGAAACTGTGCCATGGGTGAGTCACCGGTGTGCCAGTGTTTGCAGGGATTCAAGCCCAAATTACCACAGAGCTGGATTGAAATGGATTGGAGTGCAGGATGTGTTCGCAGTGGTAATTGGAGCTGCGGGGAGAAGAATAAAGATGGGTTTCTTAAATTTAGTAACTTGAAAGCGCCAGATACTAAAAGATCATGGGTTAATGGAAGCATGACACTTGAGCAATGCAAGGTCAAATGCTTAGAAAACTGCTCCTGTTCGGCTTATGCTAACTCAGACATCAGGGGACAAGGCAGTGGCTGCGCCCTTTGGTTCGGAGATCTAATTGATTTGAGACAAATTCCAGATGCTGGGCAAGATATATATATTAGATTGGCTGCCTCAGAAATAGATTTATTAGATTACTTGAGAAAAACAGAGAAAAAGAATGAGGAGGAAGATTTGGAGCTGCCATTTTTTGACTTTGCTACAGTATCTCGGGCCACCAATGATTTCTCAAGTGGCAATAAGCTGGGCGAAGGTGGCTTTGGGCCTGTATACAGGGGTACATTAGACAGAGCACAAGAGATTGCTGTCAAGAGACTTTCACAAAAATCTGGTCAAGGAATGAAAGAATTTAAGAATGAAGTCATATTATGTGCCAAACTTCAGCACAGAAATCTGGTTAGGGTTCTTGGTTGTTGCATTCAAGGAGAGGAGAAATTGCTCGTCTATGAATACATGCCCAACAAAAGCCTCGATTCCTTTCTTTTTGATTCTACTCGAAGTAAACTTCTGGATTGGTCAAAGCGTTTTCACATCATATGTGGAATTGCACGAGGACTTCTTTATCTACATCAAGATTCTAGATTACGGATCATACACAGAGATCTTAAAGCAAGTAATGTATTATTAGATAGTGTGCTAAATCCAAAAATCTCAGATTTTGGTTTGGCCCGAATGTTTGGAGCTGATCAAATTGAAGGAAATACTAGCAAAGTGGTTGGTACATATGGTTATATGGCACCTGAATATGCCATTGATGGATTATTCTCTATAAAATCTGATGTATTTAGCTTTGGTATATTATTACTGGAGATAGTAAGTGGAATGAAAAATAGAGGACTTTCCTATCCGAACCAGAGTCAAAATCTTATTGGACATGCATGGAGGTTGTGGAAAGACGGCATCCCAATGGAATTGATTGATACTTGTTTGGGGGGCTCGTATATTCAATCCCAAGTGTTACGGTGCATCCACATCGGGCTTTTATGTGTGCAACAACATCCTGACGATAGGCCAAACATGGCATCCGTGGTTGTGATGTTGAGCAGTGAAAGTGAGATGCCTCAGCCAAAGGAGCCTGGTTTTTTAATGGAAAAGACCTCAATGGACGAAGAGTCCTCTTCTGGAAAGCACAAGTCTTCTTCAAACAATGATGTAACTATGTCAATGTTAGAGGCCAGATAG 2337 0.4236 MAILPFMPVIIKLLLFLSRFSSATDIITRFQPLVDGKTLVSIDGSFELGFFSPGSSKNRYVGLWYKNIPLRTVVWVANRDNPSKDNSSMLTINTEGKLVLLSQNNTVLWSANSTARASSPIVQLLDSGNLVLRDDDNNPQNYLWQSFDYPSDTLLPGMKFGWDLRKDLNRRLTAWKNWDDPSPGDFTWSFILSNNPEMVLWKGSTEYSRGGPWNGIQFSSASSLKYNPMFDFKFVFNKDELYYTYSIKNKSVISRLVMNQTNYARQRYTWIEEAKAWRMYSSWPQDYCDKYNVCGPYGNCAMGESPVCQCLQGFKPKLPQSWIEMDWSAGCVRSGNWSCGEKNKDGFLKFSNLKAPDTKRSWVNGSMTLEQCKVKCLENCSCSAYANSDIRGQGSGCALWFGDLIDLRQIPDAGQDIYIRLAASEIDLLDYLRKTEKKNEEEDLELPFFDFATVSRATNDFSSGNKLGEGGFGPVYRGTLDRAQEIAVKRLSQKSGQGMKEFKNEVILCAKLQHRNLVRVLGCCIQGEEKLLVYEYMPNKSLDSFLFDSTRSKLLDWSKRFHIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDSVLNPKISDFGLARMFGADQIEGNTSKVVGTYGYMAPEYAIDGLFSIKSDVFSFGILLLEIVSGMKNRGLSYPNQSQNLIGHAWRLWKDGIPMELIDTCLGGSYIQSQVLRCIHIGLLCVQQHPDDRPNMASVVVMLSSESEMPQPKEPGFLMEKTSMDEESSSGKHKSSSNNDVTMSMLEAR 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1135 778 Pfam S-locus glycoprotein domain 209 317 IPR000858 GO:0048544
Glsi14g1135 778 SMART serkin_6 461 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1135 778 CDD STKc_IRAK 467 732 - -
Glsi14g1135 778 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Glsi14g1135 778 Gene3D Phosphorylase Kinase; domain 1 434 536 - -
Glsi14g1135 778 Gene3D - 18 147 IPR036426 -
Glsi14g1135 778 ProSiteProfiles Protein kinase domain profile. 461 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1135 778 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 147 - -
Glsi14g1135 778 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 427 536 - -
Glsi14g1135 778 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
Glsi14g1135 778 SMART ntp_6 342 421 IPR003609 -
Glsi14g1135 778 ProSiteProfiles PAN/Apple domain profile. 339 422 IPR003609 -
Glsi14g1135 778 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 537 740 - -
Glsi14g1135 778 Pfam Domain of unknown function (DUF3403) 733 778 IPR021820 GO:0004674
Glsi14g1135 778 MobiDBLite consensus disorder prediction 735 778 - -
Glsi14g1135 778 Pfam Protein tyrosine and serine/threonine kinase 463 730 IPR001245 GO:0004672|GO:0006468
Glsi14g1135 778 MobiDBLite consensus disorder prediction 763 778 - -
Glsi14g1135 778 Pfam PAN-like domain 339 407 IPR003609 -
Glsi14g1135 778 CDD B_lectin 31 150 IPR001480 -
Glsi14g1135 778 SUPERFAMILY Protein kinase-like (PK-like) 443 741 IPR011009 -
Glsi14g1135 778 Gene3D Transferase(Phosphotransferase) domain 1 537 746 - -
Glsi14g1135 778 MobiDBLite consensus disorder prediction 748 762 - -
Glsi14g1135 778 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 723 - -
Glsi14g1135 778 SMART blect_4 30 150 IPR001480 -
Glsi14g1135 778 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 181 IPR036426 -
Glsi14g1135 778 ProSiteProfiles EGF-like domain profile. 284 320 IPR000742 -
Glsi14g1135 778 PIRSF SRK 428 778 IPR024171 GO:0004674
Glsi14g1135 778 PIRSF SRK 1 439 IPR024171 GO:0004674
Glsi14g1135 778 Pfam D-mannose binding lectin 72 176 IPR001480 -
Glsi14g1135 778 CDD PAN_AP_plant 338 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1135 Glsi-ChrGlsi14 12263342 12266433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1135 436 778 Receptor kinase-like Gene Family AT4G23150 53.868 4.36e-128 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi14g1135 PK_Tyr_Ser-Thr 8e-48 CL0016