Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1132 ATGACAAATCTTTCTTTTATGTTTTTCATTACCAAGTTTTTATTTTTGCTCATTCATACTTCAAGTGCAGCTGACTACATTACCATATTTCAGTCAATTCCTGAAGGTAAGAGCTTAGTTTCCTCAGATGGATGTTTTGAATTTGGTTTCTTCAGTCCAGGTAATTCTGCAAACCGCTACTTAGGAATATGGTACAAGAACATTCCAATTAGAACTGTTGTCTGGGTGGCCAATCGAGGCAGCCCAATTAAAGACAAGTCTGGCATGGTGAGTATAGACAGTCAGGGAAACCTTGTGCTTCTCAGCCAGAACAAGACAGTTATTTGGTCAGCAAACCCCGGAAGAAAGGTCTTGAATCCAGTTGTTCAGCTTTTAGGATCTGGAAATTTAGTACTAAAAGATGAGAAAGACGAGAGTCCAGAAAATTACGCGTGGCAAAGCTTTGATTACCCTTCTGATACATTGTTACCGGGAATGAAACTGGGATGGGATCTAAAGACTGGTCTGAACCGGCGTCTATCTTCCTGGAAGAACTGGGACGACCCATCTCCAGGAGACTTTACTTGGGATATCGTACTTGAAGGTTACCCAGAAATAGTGATGAAGAAGGGCTTCTCGGAGTATTACCGAAGTGGCCCCTGGGATGGCTTGCGGTTCAGTGGTGCACCGGAATTAAGGACCAATCCGCTTTTCGAGTTCAAGTTTGTCTCCAGTAAGGATCAAGTGTATTATACATACTCCCTCAGGAATAAGTCAATGATTTCAAGAGTTGTCATGAACCAAACCATTTATTCTCGGCAGCGCTTCATATGGATTGAAGAAGCTCAAACTTGGAGGATTTATGCATCTGTGCCAAGAGACAACTGTGACCACTATAATCTTTGTGGCCCTTACGGAAATTGTATAATGGGTGAGTCGCCTGTCTGCCAGTGTTTAACAGGGTTTAAACCAAAATCACCAAAAAACTGGGATTTGATGGACTGGACTAAAGGATGTGTACGCAGTCAACAACTGAGCTGCCAGGATAAGAACGAAGTTGGATTTGTGAAATTTATTGGGCTGAAATATCCTGTTTCTACAGAGTCATGGGTCAATGAGGGTATGAATCTCCAGGAATGCAGAGACAAGTGCTTAGAAAACTGTTCCTGTACAGCTTATGCAAACTCAGATATCAGAGCAGGGGGTAGTGGCTGTATGTTATGGTTTGGTGACCTCATGGATATCAGACAGCTTTCTGGTGGTGGACGGGATCTATATATTCGAATGAAAACTTCTGAGATTGCTGTGAAAGATGCACATAAGATGAAGGTGGCAGCGATAATCATCAGTGTTACCTCGGTTCTTGTGATAATTTTGATCTTCTTCTACATCGGCAAGATCATGAAAAAGTTCAGAGGAGAAACAGAGAGCCACCTGCTCGCACAGAATAATGATGAAGGCCAGCAAGAAGATTTGGAACTTCCTTTCCTTGACCTTACCACAATTGTCAAAGCAACTGATGACTTCTCAACAAACAAGAAGCTTGGAGAAGGTGGTTTTGGGGTGGTATACAGGGGTACACTGGTTGATGGACAACAAATTGCTGTGAAGAGGCTTTCACAGAGTTCTGGACAGGGGATGAATGAATTTAAGAATGAAGTAATATTGATTTCCAAGCTACAGCATCGAAATCTTGTTAAGCTTCTTGGTTGTTGCATTCAAGGAGAGGAAAAAATGCTTGTTTACGAATACATGCCCAATAAAAGCCTAGACTCCTTTATCTTTGATCATGTAAAAAGTAAAGCTTTAGACTGGCCTAGGCGCTTCAACATTGTTTGTGGAATTGCTCGGGGCCTTCTATATCTTCATCAAGATTCTAGGTTAAGAATCATACACAGAGATCTTAAAGCAAGTAATATCTTATTGGACAATGAGTTGAATCCAAAAATATCAGATTTTGGCATGGCTAGAACTTTTGGAGGAGACCAAATTGAAGGAAATACAAATAGGGTGGTTGGAACATATGGTTATATGGCACCTGAATATGCCATCCATGGACTATTCTCTGTAAAATCGGATGTTTTTAGCTATGGTGTATTATTGCTGGAGATAGTAAGTGGAAAGAAGAACAGAGGATTTTCTCATTCAAATCAGAGTCTTAACCTTATTGGACATGCTTGGAGATTTTGGAAAGAAGGCAGACCTTTAGAGTTGATTGATTCATGCATGGAGGATTCATGTGTTCTATCAGAAGCACTGCGTTGCATCCATATCAGTCTTCTATGTGTGCAGCATCATCCTGAGGATAGGCCAAGTATGTCAACTGTGGCTGTCATGCTGAGCAGTGATAGTGCCTTGCCTCAACCCAAGGAACCTGCTTACATTATGGAGAAGACATTATTTGAAGCAGATTCTTCTAACAAGCATCAGTTTTCTTCAACAAATGAAATTAGCCTTACAATGTTAGAGCCTCGGTAG 2457 0.4119 MTNLSFMFFITKFLFLLIHTSSAADYITIFQSIPEGKSLVSSDGCFEFGFFSPGNSANRYLGIWYKNIPIRTVVWVANRGSPIKDKSGMVSIDSQGNLVLLSQNKTVIWSANPGRKVLNPVVQLLGSGNLVLKDEKDESPENYAWQSFDYPSDTLLPGMKLGWDLKTGLNRRLSSWKNWDDPSPGDFTWDIVLEGYPEIVMKKGFSEYYRSGPWDGLRFSGAPELRTNPLFEFKFVSSKDQVYYTYSLRNKSMISRVVMNQTIYSRQRFIWIEEAQTWRIYASVPRDNCDHYNLCGPYGNCIMGESPVCQCLTGFKPKSPKNWDLMDWTKGCVRSQQLSCQDKNEVGFVKFIGLKYPVSTESWVNEGMNLQECRDKCLENCSCTAYANSDIRAGGSGCMLWFGDLMDIRQLSGGGRDLYIRMKTSEIAVKDAHKMKVAAIIISVTSVLVIILIFFYIGKIMKKFRGETESHLLAQNNDEGQQEDLELPFLDLTTIVKATDDFSTNKKLGEGGFGVVYRGTLVDGQQIAVKRLSQSSGQGMNEFKNEVILISKLQHRNLVKLLGCCIQGEEKMLVYEYMPNKSLDSFIFDHVKSKALDWPRRFNIVCGIARGLLYLHQDSRLRIIHRDLKASNILLDNELNPKISDFGMARTFGGDQIEGNTNRVVGTYGYMAPEYAIHGLFSVKSDVFSYGVLLLEIVSGKKNRGFSHSNQSLNLIGHAWRFWKEGRPLELIDSCMEDSCVLSEALRCIHISLLCVQHHPEDRPSMSTVAVMLSSDSALPQPKEPAYIMEKTLFEADSSNKHQFSSTNEISLTMLEPR 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1132 818 ProSiteProfiles Protein kinase domain profile. 502 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1132 818 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 764 - -
Glsi14g1132 818 PIRSF SRK 1 818 IPR024171 GO:0004674
Glsi14g1132 818 Pfam Domain of unknown function (DUF3403) 774 818 IPR021820 GO:0004674
Glsi14g1132 818 Gene3D - 18 148 IPR036426 -
Glsi14g1132 818 Pfam S-locus glycoprotein domain 209 319 IPR000858 GO:0048544
Glsi14g1132 818 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Glsi14g1132 818 SMART serkin_6 502 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1132 818 CDD B_lectin 31 151 IPR001480 -
Glsi14g1132 818 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Glsi14g1132 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 148 - -
Glsi14g1132 818 Gene3D Transferase(Phosphotransferase) domain 1 578 785 - -
Glsi14g1132 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Glsi14g1132 818 SMART blect_4 30 151 IPR001480 -
Glsi14g1132 818 SUPERFAMILY Protein kinase-like (PK-like) 486 795 IPR011009 -
Glsi14g1132 818 CDD STKc_IRAK 508 773 - -
Glsi14g1132 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 467 577 - -
Glsi14g1132 818 Pfam D-mannose binding lectin 72 177 IPR001480 -
Glsi14g1132 818 Pfam PAN-like domain 340 408 IPR003609 -
Glsi14g1132 818 Pfam Protein tyrosine and serine/threonine kinase 504 770 IPR001245 GO:0004672|GO:0006468
Glsi14g1132 818 Gene3D Phosphorylase Kinase; domain 1 464 577 - -
Glsi14g1132 818 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Glsi14g1132 818 CDD PAN_AP_plant 336 421 - -
Glsi14g1132 818 SMART ntp_6 343 422 IPR003609 -
Glsi14g1132 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 781 - -
Glsi14g1132 818 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Glsi14g1132 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1132 Glsi-ChrGlsi14 12240813 12244471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1132 440 790 Receptor kinase-like Gene Family AT4G23230 53.977 1.29e-131 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi14g1132 PK_Tyr_Ser-Thr 8e-50 CL0016