Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1129 ATGGGATGTGTTGCGTCTAAACTAGAAGAGGAAGAAGAAGTGGTAGCGATTTGTAAAGAGAGGAAAAGCCTGTTAAAGCTATCCGGGGAGAGAAGATATGCTCTTGCAGAGGCGCATTAATCTTCTGAGGAAGATAGAGAAGAAAAATGGGAGGAAGAAGATGAAGTTAACAGAGAAGAAGAAGTTGAACAACCTTTTGAAGATGAAGCAGATCTTACGGGGAACAATAGCCCTTTGGACAAGAAGAAGTTTGCTGGAGTTGTGGTCAGCTGTGCTATAATCATCACGGGCATAGTAGTACTTGGATTGACCTTATGGATTCGGAAGAACAAACTAACGCAGACAGGAAAAATAATTTACTGGAAGGACAAGATGGACAAGGAAGACATTGATTTACCAATATTTGAATTTTCAGCCATCTCTAATGCAACAAATCAATTTTCAGAATGTCACAAATTGGGACAAGGTGGCTTTGGACCAGTATACAAGGGCGTACTAGCAGATGGACAAGAGATTGCAGTGAAGAGGCTTTCCAAAACTTCTGGACAAGGAACTGATGAGTTTAAAAATGAAGTCTTGTTGATTGCAAAACTTCAGCACCGCAATCTTGTAAAGCTTCTTGGTTGTTCTGTTCAACAAGATGAAAAGTTGTTGATATATGAATTCATGCCCAACAGAAGCTTGGACTACTTTATTTTCGATTCAATGAGAAGCAAGCTACTAGATTGGGATCAACGGTTTCAAATTATTTGTGGAATTGCTCGAGGGCTTCTTTATCTTCATCAAGACTCAAGATTAAGAATCATCCATAGAGATCTTAAAACTAGCAATATTCTTCTTGATAATAATATGAATTCAAAAATATCAGATTTTGGTCTGGCTAGAACTTTTGGGGGTGATCAAGCTGAGGCCAATACAACTAGAGTGATGGGAACATATGGCTATATGTCTCCTGAATATGCAGTGCATGGATATTTTTCAATTAAATCTGATGTGTTTAGTTTTGGTGTAATTATACTGGAGATAATCAGTGGAAGAAAAAATAGAGGATTTAGTGACCCACATCATCATCATAATCTTCTTGGACATGCCTGGAAACTATGGATTGAAGAAAGGCCAACAGAGCTGATGGATGACATACTACACGAATCAGCCACTTCACCTGAAGTGTTAAGATGTATTCATGTGGGTCTGTTATGTGTACAGCAAAGACCAGAGAATAGACCTAACATGTCAACAGTGGTTCTAATGTTGAATGGGGAAAAGTTATTGCCTGAACCAACTGAACCCGGGTTCTACACAGGAAGGGATCATCCAACCCAGACAGATCCTAGTCCAAGTAGTGAAAAGTGTTCATTAAATGAAGTTTCCATCTCGTTGTTAGAGGCAAGATAG 1395 0.39 MGCVASKLEEEEEVVAICKERKSLLKLSGERRYALAEAHXSSEEDREEKWEEEDEVNREEEVEQPFEDEADLTGNNSPLDKKKFAGVVVSCAIIITGIVVLGLTLWIRKNKLTQTGKIIYWKDKMDKEDIDLPIFEFSAISNATNQFSECHKLGQGGFGPVYKGVLADGQEIAVKRLSKTSGQGTDEFKNEVLLIAKLQHRNLVKLLGCSVQQDEKLLIYEFMPNRSLDYFIFDSMRSKLLDWDQRFQIICGIARGLLYLHQDSRLRIIHRDLKTSNILLDNNMNSKISDFGLARTFGGDQAEANTTRVMGTYGYMSPEYAVHGYFSIKSDVFSFGVIILEIISGRKNRGFSDPHHHHNLLGHAWKLWIEERPTELMDDILHESATSPEVLRCIHVGLLCVQQRPENRPNMSTVVLMLNGEKLLPEPTEPGFYTGRDHPTQTDPSPSSEKCSLNEVSISLLEAR 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1129 464 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 77 464 - -
Glsi14g1129 464 MobiDBLite consensus disorder prediction 47 68 - -
Glsi14g1129 464 MobiDBLite consensus disorder prediction 37 74 - -
Glsi14g1129 464 SUPERFAMILY Protein kinase-like (PK-like) 132 418 IPR011009 -
Glsi14g1129 464 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 113 222 - -
Glsi14g1129 464 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 223 426 - -
Glsi14g1129 464 ProSiteProfiles Protein kinase domain profile. 147 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1129 464 MobiDBLite consensus disorder prediction 426 452 - -
Glsi14g1129 464 CDD STKc_IRAK 153 420 - -
Glsi14g1129 464 Gene3D Transferase(Phosphotransferase) domain 1 223 424 - -
Glsi14g1129 464 MobiDBLite consensus disorder prediction 438 452 - -
Glsi14g1129 464 Pfam Protein of unknown function (DUF630) 1 40 IPR006868 -
Glsi14g1129 464 Pfam Protein tyrosine and serine/threonine kinase 151 416 IPR001245 GO:0004672|GO:0006468
Glsi14g1129 464 Gene3D Phosphorylase Kinase; domain 1 121 222 - -
Glsi14g1129 464 SMART serkin_6 147 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1129 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1129 Glsi-ChrGlsi14 12223986 12229546 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1129 87 432 Receptor kinase-like Gene Family AT4G23230 52.450 7.06e-133 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi14g1129 PK_Tyr_Ser-Thr 4.3e-46 CL0016