Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1128 ATGGAAGGTTTCGTCCTACTGCTATTGTGCCTCTCTTTGCTGCATAATATGCCATTCTCCACTGCCAGAGACAAATCTAGTGAAGGGCAGAAGCTGAAACATAAACCCAGCATCCGGAAGCAAGGGGCTATCATCATCAGCTGTGTATTGTCTGTAGGAGTTTTAATCCTATGGCTATCCTTCATCCTGTATAGATGGAAGAAGTGCCAGGAAGCCAGCAAGTCCTTGTTACAGAATCAGGTGATCAAGATATGTGATTCTTCTATAGGGTTGACTCTGGCTGAAGAATTTCCTGTCCTTCACAGCATGGGAAGGGTAATGAGTCTTTTTGTTCTAATGTTGGATGAAGAAAAGTGTAGGGTACTAGACTGGCCCAAACACTTTCACATCATCAATGAGATTGCTCGGGACCTTCTCTATCTTCATAAAGACTCAAGGCATAGAATAGTTCATAGAGATCTCAAGGCTGGAAATGTTCTGTCAGATAGCCAATTGAACCCAAAAATTTTAGACTTGGGACTAGTCAGAAGCTTTGGAGGGGATGAAAATGAAGCCAATACAAAACATGTGGTTGGAACTTAG 582 0.4244 MEGFVLLLLCLSLLHNMPFSTARDKSSEGQKLKHKPSIRKQGAIIISCVLSVGVLILWLSFILYRWKKCQEASKSLLQNQVIKICDSSIGLTLAEEFPVLHSMGRVMSLFVLMLDEEKCRVLDWPKHFHIINEIARDLLYLHKDSRHRIVHRDLKAGNVLSDSQLNPKILDLGLVRSFGGDENEANTKHVVGT 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1128 193 Gene3D Transferase(Phosphotransferase) domain 1 78 193 - -
Glsi14g1128 193 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 111 193 - -
Glsi14g1128 193 Pfam Protein kinase domain 127 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1128 193 ProSiteProfiles Protein kinase domain profile. 1 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1128 193 SUPERFAMILY Protein kinase-like (PK-like) 108 193 IPR011009 -
Glsi14g1128 193 FunFam Os07g0541700 protein 105 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1128 Glsi-ChrGlsi14 12183907 12186788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1128 108 193 Receptor kinase-like Gene Family AT4G05200 55.814 4.61e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi14g1128 Pkinase 1.2e-10 CL0016