Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1127 ATGAGCTCCATGTATGTTCACAATGCATGCATTACTCATATGCTGTCCAAGTTGGGACTAGAAGAAATTAAGTTATTGAAGCATATAGTTACTGTCAGCTTTCGTAGTCATATTGTGCTAACATATGCAATTTTTGTTTTTCTTTATGTTTCTGAACTGCTCCAAGTTGCTTATCAAACAAGAAGCAAACTGTTGAATTGGAATAAAAGGCACCATATTATAAGTGGCATTGCTCGAGGGCTTCTTTATCTTCATCAGGATTCTAGGCTAAGAATCATCCATAGGGATCTTAAAACCAGCAATATTCTTCTTGATGATGATATGGAATCAAAAATATCAGACTTTGGAATGGCTAGGACATTTGGTGGTGACCTTGCTGAAGATAATACAAAAAGAGTAGTAGGAACTCAGTAA 414 0.3575 MSSMYVHNACITHMLSKLGLEEIKLLKHIVTVSFRSHIVLTYAIFVFLYVSELLQVAYQTRSKLLNWNKRHHIISGIARGLLYLHQDSRLRIIHRDLKTSNILLDDDMESKISDFGMARTFGGDLAEDNTKRVVGTQ 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1127 137 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 41 136 - -
Glsi14g1127 137 Gene3D Transferase(Phosphotransferase) domain 1 11 137 - -
Glsi14g1127 137 FunFam Os07g0541700 protein 51 136 - -
Glsi14g1127 137 Pfam Protein kinase domain 40 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1127 137 SUPERFAMILY Protein kinase-like (PK-like) 23 136 IPR011009 -
Glsi14g1127 137 ProSiteProfiles Protein kinase domain profile. 1 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1127 137 ProSitePatterns Serine/Threonine protein kinases active-site signature. 92 104 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1127 Glsi-ChrGlsi14 12180339 12181619 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1127 60 136 Receptor kinase-like Gene Family AT4G11480 68.831 8.28e-32 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi14g1127 Pkinase 8.6e-17 CL0016