Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1126 ATGGAACTAAACTCAGCTCTTACTTCAACGCTGGTTAGGTTGTGTCTAACCTTGCAGTCCAACGCAGTTACCTATAAAGAAACCTTGCTAATGGGCCGGTCGATTGGAACCTCTGATACTATGGACCAGGGTTATCCCACTGGGCCAGGGGATAATCCTCGACTGGTTCTGGAGGTATCGGTGAGCTTAACCAACAGTTCTGGTCACAGGATAGCAAACAGTGGGTTTCTCTGCAGTCATCCAAGTGCTGAAGAACTGCCTCGTGGAAAATTTGGCATTTGCAATCCTCAAGCCCTTGACACTTAAAAGAAAGGTGAATACACTCCTATTTTGAGTGGTTTTGATGAAAGGTTAATGTTTGACGGTGTTGGTCTACACTCATCTGCAATGGTCAAGATAATCTGGGAAACAAGAAGGATAGGTTCTGTACATTATCCTGTAGAACAAAATATTCTTCCAAGAATGTCCCACATACTCGTTTTCTTTTGCCAAAAGAGAAGCAATGTTGAAGACAAGCTGTTACGTCAAGCAATTAGCAAAGGCGACGATCCAAGACAGATAAGCACTCAGTGGTTCAGTGGTCAGCTTGAATCTAACGAGTCACAGGTTCGAGGCCTGTTCTTACCCAATGCTAAGACTGAATTTGGAAGGCAGGAACGGCCTCACGTTGTTTCCCTCCTATTTTTCTTGCTCTTCCCAGTGGCTAAGTTCACAACCAAAGTCGCTGCGTCAGAGCTAGATTTTATGGAGAATAAAGGCCATGGGAACATCAATAAAGGAAAGCTTGCAGGAATGGCAGTTGGTTCTGTAATATTAAACTTGGGCATGCTACTGATAATTTATGGATTGATTAAATGTGCAAGGAAAAAGAAACTCAAAAAGCCTGGGATGACAAAAATGTATCACAAGAATCCTTACTACAATAAATTAAATAAGGAACACATGGATCTACAGATATTTGATTTTTCAGTCATAGCTGAAGCCACTGACAATTTTTCAAGCACCAATAAATTGGGAGAAGGTGGCTTTGGACCAGTATACAGGGGTACCCTGAGAGATGGGCAAGTGTTAGCTGTGAAGAGGCTGTCAAAAAATTCTGGTCAGGGGTTAGCAGAGTTCAAAAATGAAGTTGTGTTGATTGCCAAACTTCAGCATCGTAATCTTGTGAAGCTTATTGGTTGCTGCATTGAAGGAGAAGAACAAATGTTGATTTATGAATACATGCCTAACAAAAGCTTGGACTACTTTATTTTTGATGAAACTAGGAGCAAGTTGTTAGATTGGATTAAGCGTTTGCACATTATTAATGGCATTGCTCGCGGACTTCTTTATCTTCATCAAGACTCTAGACTGGGGATCATTCATAGAGATCTAAAAGCTAGTAATATTCTACTAGACGCAAATTTAAATCCAAAAATATCGGACTTTGGCCTGGCTCGGACGTTTTGGGGAGATCAAATTGAGGCCAAAACACACAAAATAGCTGGAACATACGGTTACATGTCTCCTGAGTATGCTGTGCATGGACATTTTTCAGTGAAATCTGATGTTTTTAGTTTTGGAGTTATAGTATTAGAGATGATTAGTGGAAAGAAGAATATGAAATTTTCAGACCCAGAACACTGCCTTAATCTTCTTGGATATGCATGGGCAAAATGGAGTGAAGGAATGCCTTTGGAACTAATGGATCAAGCGTTGAGAGAAAGATACAATCCATCTGAAGTGATACAATGCATACAGGTGGGCTTGTTATGCGTTCAACAAAGACCAGAAGATAGGCCAGACATGTCATCTGTGGTTCTAATGCTGAATGGTGAAAAATCATTGCCTAAGCCAAAAGTTCCTGGTTTCTACATTGAAAAGGATGTACCTGAAGCAGATTCTTCATCTCCAAAACGCAAGCTGTTCTCACCAAATGAAATCTCCCTTACAATGTTCGATGCAAGATAG 1950 0.4077 MELNSALTSTLVRLCLTLQSNAVTYKETLLMGRSIGTSDTMDQGYPTGPGDNPRLVLEVSVSLTNSSGHRIANSGFLCSHPSAEELPRGKFGICNPQALDTXKKGEYTPILSGFDERLMFDGVGLHSSAMVKIIWETRRIGSVHYPVEQNILPRMSHILVFFCQKRSNVEDKLLRQAISKGDDPRQISTQWFSGQLESNESQVRGLFLPNAKTEFGRQERPHVVSLLFFLLFPVAKFTTKVAASELDFMENKGHGNINKGKLAGMAVGSVILNLGMLLIIYGLIKCARKKKLKKPGMTKMYHKNPYYNKLNKEHMDLQIFDFSVIAEATDNFSSTNKLGEGGFGPVYRGTLRDGQVLAVKRLSKNSGQGLAEFKNEVVLIAKLQHRNLVKLIGCCIEGEEQMLIYEYMPNKSLDYFIFDETRSKLLDWIKRLHIINGIARGLLYLHQDSRLGIIHRDLKASNILLDANLNPKISDFGLARTFWGDQIEAKTHKIAGTYGYMSPEYAVHGHFSVKSDVFSFGVIVLEMISGKKNMKFSDPEHCLNLLGYAWAKWSEGMPLELMDQALRERYNPSEVIQCIQVGLLCVQQRPEDRPDMSSVVLMLNGEKSLPKPKVPGFYIEKDVPEADSSSPKRKLFSPNEISLTMFDAR 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1126 649 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 229 625 - -
Glsi14g1126 649 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 408 611 - -
Glsi14g1126 649 SMART serkin_6 332 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1126 649 Pfam Protein tyrosine and serine/threonine kinase 335 601 IPR001245 GO:0004672|GO:0006468
Glsi14g1126 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Glsi14g1126 649 Gene3D Phosphorylase Kinase; domain 1 306 407 - -
Glsi14g1126 649 Pfam Domain of unknown function (DUF3403) 608 649 IPR021820 GO:0004674
Glsi14g1126 649 CDD STKc_IRAK 338 605 - -
Glsi14g1126 649 ProSiteProfiles Protein kinase domain profile. 332 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1126 649 Gene3D Transferase(Phosphotransferase) domain 1 408 612 - -
Glsi14g1126 649 SUPERFAMILY Protein kinase-like (PK-like) 314 625 IPR011009 -
Glsi14g1126 649 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 297 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1126 Glsi-ChrGlsi14 12165635 12176368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1126 243 618 Receptor kinase-like Gene Family AT4G23190 51.053 1.54e-128 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi14g1126 PK_Tyr_Ser-Thr 4.5e-48 CL0016