Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1124 ATGACTACTTTTATGCGGTGGCTAACTCTAAAGGAGAATCCTTTGAAAGATGAAACTAAAAGAAAGCTCTTGGATTGGCTCAAGCGATTCCACATTATTGGTGGCATTGGTCGAGGGCTTCTCTATCTTCATCAAGATTCTAGATTGAGAATTATTCATAGAGATCTCAAAACTAGTAATATTCTACTTGATGCCCATATGAATCCAAAAATCTCAGACTTTGGCTTGGCTAGAATTTTTTGGGGAGATCAAGTTGAAGCCAATACAAATAGAGTGGTTGGAACATATGGTTACATGCCTCCTGAATATGCTGTACATGGACATTACTCAATAAAATCTGATATCTTTAGTTTTGGCGTGATAGTATTAGAGATTGTTAGTGGAAAGAAGAATAGAGAATTTTTTGACCCAGAACACAGCCTTAATCTTCTTGGTCATGCATGGAGACTCTGGACTGAAGAGAGGCCATTAGAACTTATAGATAAGTTCTTAGGTGAAAGTTGCACTCCTTCTGAAGTCATTCGATGCATACATGTGGGGTTGTTATGCGTACAACAAAAACCAGAAGACAGGCCAGACATGTCATCTGTGGTTCTTATGCTGAATGGCGAGAAATTATTGTCAAAGCCAAAGGCTCCTGGATTTTATACCGGAAGGGATTTATCTGAAGCAGATTCTACGTCCAGAAATTGTAATCAGTTTTCCCCAAATGAGATGTCCCTTACTGTTTTTGAGGCAAGATAG 744 0.3871 MTTFMRWLTLKENPLKDETKRKLLDWLKRFHIIGGIGRGLLYLHQDSRLRIIHRDLKTSNILLDAHMNPKISDFGLARIFWGDQVEANTNRVVGTYGYMPPEYAVHGHYSIKSDIFSFGVIVLEIVSGKKNREFFDPEHSLNLLGHAWRLWTEERPLELIDKFLGESCTPSEVIRCIHVGLLCVQQKPEDRPDMSSVVLMLNGEKLLSKPKAPGFYTGRDLSEADSTSRNCNQFSPNEMSLTVFEAR 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1124 247 SMART serkin_6 7 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1124 247 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 15 244 - -
Glsi14g1124 247 Pfam Domain of unknown function (DUF3403) 207 247 IPR021820 GO:0004674
Glsi14g1124 247 Gene3D Transferase(Phosphotransferase) domain 1 8 211 - -
Glsi14g1124 247 SUPERFAMILY Protein kinase-like (PK-like) 14 201 IPR011009 -
Glsi14g1124 247 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 10 209 - -
Glsi14g1124 247 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1124 247 ProSitePatterns Serine/Threonine protein kinases active-site signature. 51 63 IPR008271 GO:0004672|GO:0006468
Glsi14g1124 247 Pfam Protein kinase domain 31 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1124 Glsi-ChrGlsi14 12127987 12131923 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1124 15 247 Receptor kinase-like Gene Family AT4G11530 57.261 4.82e-89 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi14g1124 Pkinase 2.4e-26 CL0016