Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1123 ATGGACAAGAAGCAGCCCACTACTTTGGCCACTCAATACTGTGGTTGGGCGCTGCCTCCGGAGCACCGCCCAGAGAACAACAATGTTATTGAGAAAGCATTTAAAGGAACAATCAGCAAAACGCAATGCAAGCTATGTACAGGTGTGGGCCCAGCTGATGATTTTACAAAGCCAAAGCTGGAGAAGAAGAAGGAGGTCTTGGAGGACCTGACTCGAATCATAACTTTGCGGACCACCAACTCCATTACCTATAAAGAAACCTTGTTAATGGGCCAGTCAATTGGACTTTCGGATACTCTGGTGTCTGCTAATGGGAGCTTCGAACTGGGTTTTTTCAGTGAACAGAATTCAAGTAAGTACTATGTGGGGATGTGGTTTAGGGAAGCTCCTAAAGGTAACCTTCTGTTAGTGAACAACTCGAATTTGAACATTTTATGGGAAAGTTTTGACCATCCTACAGACACCCTTTTGCCTGGAATGAAAATAGGATTTGATACAGAATCAGGGCAGAGCTGGTCATTGAGATCGTGGACAAGTGCACAAGACCCAAGTCCTGGTGTTTTCTCTCTGGAAGCGGATGTGAGTATGCAGAGGATAGTCATCAAGAGGGAGTCTGCCATATACTGGATTGACGATGAAAACTTTGGAAGTTTTTTTAAACGAGACTATACGGTCTGGAACCAGCGATATTGGATTTGGCAAGGGGAATATGGTTCTCAATTGGTACTGGAAGTATCTGGGGAGCTTAACCTACAAAACTGGTCAGTAGATACCAGACAGTGGGTTTCCTTCCAGTCATCGAAGTGCCCGACAAATACATGTGGAAATTTTAGCATTTGCAATCCGCAAGCTGATGATCCTTGTGAGTGTCTGCAAGGTTTTCAGCCGTATGATGCAAATGCTTGGAAGAAGGGGAAAACATCCGCCGGCTGTGTGAGGAAAACAGAGTTGCTCTGCACCAACACAAGCAGTAATGGATTAAATGACGACTTTGTTCCTATGAAAGGAGTGGATTTTCCTTTTGATGGTTCGCTTTTCTTCGATACTGATAAAGCATCAACATGTGTAAGCGCTTGCTCTACCAATTGCTCTTGCATCGCTTATGCTTACGATCTTACTAGGCGTAGGTGCTTTTCATGGTATGTTCACTTGTTCAATCTGAAAAACGTCTCAGTTGATGCTGGAGTCTATAATAGTTCACCAACGCTCTTTCTCAAACTTGCTGCCTCTGAATTGAAGAACAATGAGTCGAATACAAGGAATAATCTGGATCATAAATCTAGTCACAGCCGGAAGATAGCACTAATAATTGTCATACTGATCTTATTCGTAGCATTGCTTACACTGGTCCTATTTGCTTATCACTACAGAAGGAAAAAGCTAAGGGGAAATGGGGAAGATCTGCTATTGTTTGATGTAGGCATGAGCATGAAAGTTAACAGTTCGGAGCTTACAGATTCAGAGAAGGTTACAAAAGTTAACAAGAGGGAAGTCAGATTGCCATTGTTCAATTTTGCAAGTGTTTCTGCGGCAACTGATAACTTCTCAGCCGAAAACAAGCTTGGTGAGGGTGGCTTTGGACCTGTTTACAAGGGGAAGCTGTTGAATGGGGATGAGGTTGCTGTAAAAAGGCTATCCTCAAGGTCTGGTCAAGGATGGGAGGAGTTGAAAAATGAAGCATTGCTCATTGCAAAACTCCAACACAATAATCTTGTTAGACTTTTGGGTTGCTGCATTGAACGAGATGAAAAGATGCTGATTTATGAGTTTATGCCAAATAAAAGCTTGGACTTTTTCCTCTTTGATGCAACAAAAAGCAGGATTCTAGATTGGGGAACCCGGGTTCGGATAATAGATGGGATTGCCCAAGGTCTTCTTTATCTTCACCAGTATTCTAGGTTTCGGATCATCCACAGAGACCTTAAAGCTAGCAACATATTATTGGACATTAACATGAATCCCAAAATATCAGATTTTGGAATGGCAAGAATGTTTGATGGGAATCAACTACAAGCAAATACAAACCGGATAGTTGGAACTTATGGCTATATGGCTCCTGAATATGCTTTGGAAGGCCTTTTCTCAGTAAAGTCTGATGTGTTTAGTTTTGGGGTTCTTTTGCTGGAGATAATAAGTGGCAAGAAGAATACTGGTTTCTACAACACAAACTCTCTCAATCTTCTTGGACATGCGTGGGACCTATGGACTAGCGGTAGGGGAATAGAACTGATGGATTCAGTGGTACAAGATGCATCCATCAAGAAAATGGTGGTGCAAAGGTACGTGAACATAGCACTGCTTTGTGTTCAAGAAAGTGCAGCAGATAGACCCACCATGTCAGATGTTGTTTCAATGCTTGGCAATGAGAATGCAGTTTTACCTTATCCTAAAACTTATGCTTTCCTAAATGTGAGAGGTATGAATAAGCATTCAGGATCGGATGGAAGCTCAACAGGAAATGTTTCTGTTAATGCCATGACAGCTACCGTTATGGAAGCAAGATGA 2505 0.4228 MDKKQPTTLATQYCGWALPPEHRPENNNVIEKAFKGTISKTQCKLCTGVGPADDFTKPKLEKKKEVLEDLTRIITLRTTNSITYKETLLMGQSIGLSDTLVSANGSFELGFFSEQNSSKYYVGMWFREAPKGNLLLVNNSNLNILWESFDHPTDTLLPGMKIGFDTESGQSWSLRSWTSAQDPSPGVFSLEADVSMQRIVIKRESAIYWIDDENFGSFFKRDYTVWNQRYWIWQGEYGSQLVLEVSGELNLQNWSVDTRQWVSFQSSKCPTNTCGNFSICNPQADDPCECLQGFQPYDANAWKKGKTSAGCVRKTELLCTNTSSNGLNDDFVPMKGVDFPFDGSLFFDTDKASTCVSACSTNCSCIAYAYDLTRRRCFSWYVHLFNLKNVSVDAGVYNSSPTLFLKLAASELKNNESNTRNNLDHKSSHSRKIALIIVILILFVALLTLVLFAYHYRRKKLRGNGEDLLLFDVGMSMKVNSSELTDSEKVTKVNKREVRLPLFNFASVSAATDNFSAENKLGEGGFGPVYKGKLLNGDEVAVKRLSSRSGQGWEELKNEALLIAKLQHNNLVRLLGCCIERDEKMLIYEFMPNKSLDFFLFDATKSRILDWGTRVRIIDGIAQGLLYLHQYSRFRIIHRDLKASNILLDINMNPKISDFGMARMFDGNQLQANTNRIVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGKKNTGFYNTNSLNLLGHAWDLWTSGRGIELMDSVVQDASIKKMVVQRYVNIALLCVQESAADRPTMSDVVSMLGNENAVLPYPKTYAFLNVRGMNKHSGSDGSSTGNVSVNAMTATVMEAR 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1123 834 Pfam Protein tyrosine and serine/threonine kinase 517 786 IPR001245 GO:0004672|GO:0006468
Glsi14g1123 834 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 591 794 - -
Glsi14g1123 834 Gene3D Phosphorylase Kinase; domain 1 489 590 - -
Glsi14g1123 834 ProSiteProfiles PAN/Apple domain profile. 319 403 IPR003609 -
Glsi14g1123 834 ProSiteProfiles Protein kinase domain profile. 515 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1123 834 Gene3D Transferase(Phosphotransferase) domain 1 591 793 - -
Glsi14g1123 834 CDD STKc_IRAK 521 786 - -
Glsi14g1123 834 PIRSF SRK 66 131 IPR024171 GO:0004674
Glsi14g1123 834 PIRSF SRK 129 834 IPR024171 GO:0004674
Glsi14g1123 834 Pfam D-mannose binding lectin 115 177 IPR001480 -
Glsi14g1123 834 CDD PAN_AP_plant 315 408 - -
Glsi14g1123 834 SUPERFAMILY Protein kinase-like (PK-like) 496 786 IPR011009 -
Glsi14g1123 834 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 113 802 - -
Glsi14g1123 834 SUPERFAMILY alpha-D-mannose-specific plant lectins 130 182 IPR036426 -
Glsi14g1123 834 Pfam PAN-like domain 328 386 IPR003609 -
Glsi14g1123 834 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Glsi14g1123 834 FunFam Uncharacterized protein 490 590 - -
Glsi14g1123 834 Pfam S-locus glycoprotein domain 232 296 IPR000858 GO:0048544
Glsi14g1123 834 SMART serkin_6 515 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1123 834 SMART ntp_6 326 402 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1123 Glsi-ChrGlsi14 12112301 12122811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1123 481 801 Receptor kinase-like Gene Family AT4G11530 56.966 1.19e-119 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi14g1123 PK_Tyr_Ser-Thr 9.7e-48 CL0016