Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1102 ATGATGTTAACCGCTACGCCTTCGTCGATAGCGAGGAGCTCGCTAGAAGAAATGCTAGAGTCACTCCGGCGGAGAGAAGAAGAAGGGAAGCCGAAGGACTTGCCGCCGGCATTGCCAGCTCGTCCAACCTCGAGAGCCCGGCTTCCCTCAGCAAGACGATCTTTGCCCAATAGCTTTAAGGTTGACGGTGAAGGTGATCGTGGTGCAACAGAAATCTTGTCTAAGCAATTTAATGTAAATGAAGAGACGAAGAGGAAAGAGTCGGATAAGGGACACAAGAGAAAAGGTAGTTTGGGGAGCAAGAAGATGAAGACGGACATGGAATCGCCTTACATCGTGACATCAGAAGAGAATATGAGCCAACACTCATCGGAGGGTCCGATTTCAGCATCTACTGCTTCCGTAGCTACATCAGGGAAGATTCAGGAATTGGATTGGGATGACAACATTGCTTATTACATCAAAAAGAAACTTCGTGTTTGGTGTAGGCAACCAAGAGGACAGTGGGGACTAGGAATGATACAGTCAACTTCAGGAGAGGAAGCTTCTATCTCACTCTCAAATGGAAATGTTATGAAAGTGGCAAGATCAGAGCTTTTACCAGCTAATCCAGATATTTTAGAGGGCGTGGATGATCTTATACAGCTTAGTTACTTGAATGAGCCCTCAGTTCTTCACAATCTCCAGTTTAGATATTCTCAAGAGATGATTTATAGTAAAGCAGGACCCATTTTAATTGCACTCAACCCCTTCAAAGATGTTCAGATATATGGAAATGATTATGTCTCAGCTTATAGGCAGAAAATTATGGATAGCCCTCATGTTTATGCTATGGCAGATGCGGCTTATAACGAGATGATGAGAGATGAAGTAAATCAGTCCATTATTATAAGTGGCGAGAGTGGATCTGGGAAGACAGAGACAGCAAAAATTGCTATGCAATACTTAGCTGCTCTGGGTGGCGGCAGTTGCGGGATAGAAAATGAAGTTCTTCAGACAAATTGTGTACTAGAAACTTTTGGGAATGCTAAAACATCTAGGAATGACAACTCTAGCAGATTTGGGAAGTTGATTGAAATTTATTTCAGTATGGTGGGGAAGATATGTGGGGCTAAAATTCAAACCTTTCTGTTAGAAAAGTCAAGAGTTGTTCAACTTGCCAGTGGTGAGAGGTCGTATCACATTTTTTATCAACTTTGTGCTGGTTCTTCACCTGATCTCAGAGAGAGACTGAATCTCAAAACAGCCAGTGAATATAAATATCTTAACCAAAGTGGCTGCATGACAATTGATGGGGTTAATGATGCTCAAAATTTTCATAGGCTGATGAAAGCACTGGATGTTGTTCGAATTTGCAAAGAGGATCAAGAGCTAGTCTTTAGGATGCTTGCTGCAATATTATGGCTGGGAAATATATCATTCCAAGTAACTGACAATGAAAACCACGTTGAGGTTGTGGGTGATGATGCTGTAACCAGTGCTGCCCTGCTGATGGGTTGCAGTTCTAAGGAGTTAATGGTAGCTTTATCTACCCGCAAAATCCAAGCTGGAAAAGATACTATTGCCAAAAGGTTGACATTGTGTCAGGCAACTGACACAAGAGATGCTTTGGCAAAGTTCATCTATGCTAGCTTGTTTGACTGGCTTGTAGAACAAGTTAACAAGTCACTTGAAGTGGGTAAATCGTGTACTGGGAGATCCATAAGTATCCTGGATATCTATGGGTTTGAGTCATTCCAAAGAAACAGCTTTGAACAGTTGTGTATCAATTACGCCAATGAGAGGCTTCAACAACATTTTAATCGGCATCTGTTTAAACTTGAGCAGGAGGACTATGAATTGGATGGCGTTGATTGGACAAGAGTAGATTTTGAGGACAATCAAGAGTGCTTGGATCTTTTTGAGAAGAAACCTCTGGGCCTACTCTCTCTGTTGGATGAGGAATCTAATTTCCCCAGGGCCACTGATCTAACATTTGCCAACAAACTTAGACAGCACCTAAATGCTATTCCTTGCTTCAAAGGGGAAAGAGGCAGAGCTTTCAGTGTTCGTCACTATGCAGGGGAGGTTTTGTATGATACAAATGGATTTCTAGAAAAGAACAGAGATCCGATGCCTTCTGATTCCATTCAACTCCTGTCATCATGTAGTTGTCAACTGCTGCAGTTGTTCTCCCAAATGCTTAATCAGTCTCAGAAGCAATCAATAGGTGCACAAGGTTCACAAAAGCAGAGTGTTGGCACAAAGTTCAAGGGTCAATTATTCAAGTTGATGCATCAGTTGGAGAGCACTACACCTCACTTTATTCGCTGTATAAAGCCAAATACTAAGCATCTTCCAGGTATATATGATGAGGACCTTGTCTTACAACAGCTCAGGTGTTGTGGAGTTTTGGAGGTTGTTAGAATTTCAAGGGCTGGATTTCCTACTCGAATGACGCATCAAGAGTTTGCCAGAAGGTATGGGTTTCTGCTTTCTGAGGCCAATGTATCTCAGGATCCATTAAGCATCTCAGTTGCTGTTTTGCAACAATTTAATATCCCTCCTGAAATGTACCAAGTTGGCTACACAAAACTGTATCTTCGAACAGGGCAGATTGGTACACTGGAGGATAGAAGAAAACAGGTTATGCGGGGAATTCTTGGGGTTCAAAAATGCTTTCGTGGTCATCAAGCTCGCCGAATTTTTGATGAACTCAAGAATGGAGCAATAACACTACAATCATTTATCCGTGGAGAGATTTTGAGGATGAAATATGAAGTTATGGTGAAGTCTTCTGTAAATACTGCTTCTGAAAAGCAGGAGAACCAGGCAGTCATACTACTACAATCTGTAATTCGTGGGTGGCTGGTTCGAAGGCATGCTTGTGGCATGCATAGGTTGAAGAAAGATCCTAAAATTGCAAAACCTAAGCGGAAGTCACGTGTTAAGATGTTAGAAGTGAAGGTTGAGAATCAGCCTTCAGCTTTAGCAGAACTCCAAAGGCGGGTTCTCAAGGCTGAAGCAACTCTGGAGTTAAAGGAAGAGGAAAATACTGCGTTGAGGGAGCAACTGAAACAATTTGAGACAAGGTGGATTCAGTATGAGATGAAGATGAAATCAATGGAAGAGATGTGGCGAAAACAGATGGCATCTTTGCAAATGAGTCTTTCTGCTGCTAGAAGGAGCCTTGCTGCTGAGAATACCACTGGTCAATCCGGAAGGCATGATGTTATGTCACCTTGCTGCTATGATTCTGAAGATGCCAGTTTCATGAGATCTCGAACACATGGTGGCAGCAAAATACCTTTTAAGTTTTCTAGTTCTCTCTCTGAGAATGGAGAAGGGAGAGAGTCTAATGGTACTTCAAATGCGGTCAGGAATCTGATGAAGGAATTTGAGCAGCGGAGACAGACCTTTGATGATGATGCCAAAGCTCTGTTTGAGGTTAAATCAGGGCACCCTGCTCACATGAATACCAGTGAAGAACTTCGGAAACTTAAAAACAGGTTCGAGGGATGGAGAAAAGAATACAAGGTTAGATTACGGGAGGCAAAAGTTAGGCTTACTAAATCAGGGAATCCGGAAATGGAAAACAGTTGTCGGAAATGGTGGGGGAAGATAAGCACAAGAGGGCTATAG 3621 0.4242 MMLTATPSSIARSSLEEMLESLRRREEEGKPKDLPPALPARPTSRARLPSARRSLPNSFKVDGEGDRGATEILSKQFNVNEETKRKESDKGHKRKGSLGSKKMKTDMESPYIVTSEENMSQHSSEGPISASTASVATSGKIQELDWDDNIAYYIKKKLRVWCRQPRGQWGLGMIQSTSGEEASISLSNGNVMKVARSELLPANPDILEGVDDLIQLSYLNEPSVLHNLQFRYSQEMIYSKAGPILIALNPFKDVQIYGNDYVSAYRQKIMDSPHVYAMADAAYNEMMRDEVNQSIIISGESGSGKTETAKIAMQYLAALGGGSCGIENEVLQTNCVLETFGNAKTSRNDNSSRFGKLIEIYFSMVGKICGAKIQTFLLEKSRVVQLASGERSYHIFYQLCAGSSPDLRERLNLKTASEYKYLNQSGCMTIDGVNDAQNFHRLMKALDVVRICKEDQELVFRMLAAILWLGNISFQVTDNENHVEVVGDDAVTSAALLMGCSSKELMVALSTRKIQAGKDTIAKRLTLCQATDTRDALAKFIYASLFDWLVEQVNKSLEVGKSCTGRSISILDIYGFESFQRNSFEQLCINYANERLQQHFNRHLFKLEQEDYELDGVDWTRVDFEDNQECLDLFEKKPLGLLSLLDEESNFPRATDLTFANKLRQHLNAIPCFKGERGRAFSVRHYAGEVLYDTNGFLEKNRDPMPSDSIQLLSSCSCQLLQLFSQMLNQSQKQSIGAQGSQKQSVGTKFKGQLFKLMHQLESTTPHFIRCIKPNTKHLPGIYDEDLVLQQLRCCGVLEVVRISRAGFPTRMTHQEFARRYGFLLSEANVSQDPLSISVAVLQQFNIPPEMYQVGYTKLYLRTGQIGTLEDRRKQVMRGILGVQKCFRGHQARRIFDELKNGAITLQSFIRGEILRMKYEVMVKSSVNTASEKQENQAVILLQSVIRGWLVRRHACGMHRLKKDPKIAKPKRKSRVKMLEVKVENQPSALAELQRRVLKAEATLELKEEENTALREQLKQFETRWIQYEMKMKSMEEMWRKQMASLQMSLSAARRSLAAENTTGQSGRHDVMSPCCYDSEDASFMRSRTHGGSKIPFKFSSSLSENGEGRESNGTSNAVRNLMKEFEQRRQTFDDDAKALFEVKSGHPAHMNTSEELRKLKNRFEGWRKEYKVRLREAKVRLTKSGNPEMENSCRKWWGKISTRGL 1206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1102 1206 MobiDBLite consensus disorder prediction 1 15 - -
Glsi14g1102 1206 ProSiteProfiles Myosin motor domain profile. 208 874 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi14g1102 1206 Gene3D - 880 927 - -
Glsi14g1102 1206 Gene3D - 391 447 - -
Glsi14g1102 1206 ProSiteProfiles IQ motif profile. 899 928 IPR000048 GO:0005515
Glsi14g1102 1206 Coils Coil 990 1024 - -
Glsi14g1102 1206 Gene3D - 808 875 - -
Glsi14g1102 1206 Coils Coil 1150 1170 - -
Glsi14g1102 1206 CDD MYSc_Myo8 222 862 IPR036022 -
Glsi14g1102 1206 ProSiteProfiles IQ motif profile. 935 964 IPR000048 GO:0005515
Glsi14g1102 1206 FunFam Unconventional myosin-XIX 579 764 - -
Glsi14g1102 1206 Pfam IQ calmodulin-binding motif 902 919 IPR000048 GO:0005515
Glsi14g1102 1206 Pfam IQ calmodulin-binding motif 937 954 IPR000048 GO:0005515
Glsi14g1102 1206 Pfam IQ calmodulin-binding motif 879 896 IPR000048 GO:0005515
Glsi14g1102 1206 Gene3D Kinesin motor domain 207 807 IPR036961 -
Glsi14g1102 1206 PANTHER MYOSIN 201 1193 - -
Glsi14g1102 1206 Pfam Myosin head (motor domain) 210 862 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi14g1102 1206 MobiDBLite consensus disorder prediction 17 34 - -
Glsi14g1102 1206 MobiDBLite consensus disorder prediction 1 106 - -
Glsi14g1102 1206 Gene3D - 579 764 - -
Glsi14g1102 1206 FunFam Myosin IE heavy chain 448 556 - -
Glsi14g1102 1206 MobiDBLite consensus disorder prediction 78 94 - -
Glsi14g1102 1206 SMART iq_5 934 956 IPR000048 GO:0005515
Glsi14g1102 1206 SMART iq_5 898 920 IPR000048 GO:0005515
Glsi14g1102 1206 SMART iq_5 875 897 IPR000048 GO:0005515
Glsi14g1102 1206 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 155 204 IPR004009 GO:0003774|GO:0005524|GO:0016459
Glsi14g1102 1206 ProSiteProfiles IQ motif profile. 877 905 IPR000048 GO:0005515
Glsi14g1102 1206 FunFam Myosin heavy chain 391 447 - -
Glsi14g1102 1206 PRINTS Myosin heavy chain signature 620 648 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi14g1102 1206 PRINTS Myosin heavy chain signature 335 362 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi14g1102 1206 PRINTS Myosin heavy chain signature 567 595 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi14g1102 1206 PRINTS Myosin heavy chain signature 292 317 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi14g1102 1206 PRINTS Myosin heavy chain signature 238 257 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi14g1102 1206 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 955 IPR027417 -
Glsi14g1102 1206 MobiDBLite consensus disorder prediction 1095 1117 - -
Glsi14g1102 1206 Gene3D Myosin VI head, motor domain, U50 subdomain 448 556 - -
Glsi14g1102 1206 SMART MYSc_2a 202 875 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1102 Glsi-ChrGlsi14 11985636 11996827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1102 1 1200 Myosins gene family AT5G54280 63.688 0.0 1587