Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1099 ATGAAAAATGGTCTTAGATATGTATTGATTGATGTTCAAGGGGAGAAAGAAAACGGCGCAGATAATAAAAGTCAAGAGTGGTATCTCGATTGTGATCTCTCTTGCTCTTCTTCTCTTGTTTTGGTCGCATTACAATCAAAGACGAGTAGTGAGGGGGAGAGGAAAGACAAAGAGCGTGAAAAGACCAATTTGGCCATCGAATCGATCTTCATCTTCCTCTCTCTCGCTTCTATTAGCTTTTTCTTCTTCTTGCTTTGTTTTTGTTTCTGTTGTTTTCTACGGCTCACCATGAACCAGAAGGCTAACGTGTCTAAAGAGCTCAACGCCAAGCACAGAAAGATACTGGAAGGACTTCTGAAATTACCAGAAAATAGGGAGTGTGCTGACTGCAAAGCTAAAGGTCCAAGATGGGCTAGTGTGAACCTAGGCATCTTTATATGCATGCAGTGTTCAGGAATACATCGAAGTCTGGGGGTACATATATCAAAGGTGCGATCTGCTACTCTTGACACTTGGCTTCCAGAGCAGGTTGCATTCATTCAATCAATGGGAAATGAGAAAGCAAATAGCTATTGGGAATCAGAGTTACCTCCACATTATGATAGAGTTGGAATCGAGAATTTCATTCGTGCAAAGTATGAAGAGAAGAGATGGGTTCCAAGGGATGGAAAACCAAAATCACCTTCTAGACTGCAGGAAGACAAGGCTTCTTCACATTGGCAGAGGCCTGCAGAAAGAAGTGGGCATGTTTCTAATGCATCTGCTTCTGAGAATACTTTTGAGGAAAGGAAGAAAATTGATCCAACAAATACAATTACTGCCACAAGAATTAGTGTTCCCGCTCCTCCAAAAGGACCTGACCAGGTAACACCTGTTACAAAACCTCAGCATGTTGAGAAAGTGGAATCTGTGGCATCTCAACCTCAGGCTGAGACATCAAAGCAGGCTACTGACATGGCTCAGAATACCCCTACAAAAGTTGACTATGCTACGGATCTTTTTAACATGTTGTCCATGAATGAACCGAATGAAAATGGCTCAGAGGCAGCTGATGCTACTGCTGATGATAATAACTGGGCAGGTTTTCAGTCTGCTGCAGAGGCATCAACAGCTGAGAAGACTGGTCCCACAAAAGCAGTTGATGGTACTTCTCCGTCTGCTTCTGGAATTGAGGATCTTTTTAAGGATTCACCTTTGTTGGCACCAAGCTTAGTTCCAGAAAAACCACAAAAAGATGTAAAAAATGATATCATGAGCCTCTTTGAGAAGTCCAGTATAGTGTCTCCATTTTCTATGCATCAGCAGCAGATTGCCATGCTGGCACAGCAACAGTCCCTACTAATGGCTGCTGCAGCTAAATCTGCTGGCTGGGACCCCAAGAATCCTGGTAGTTTACAACAATTTGGGCTGAATGGGTCCAATATTCCTGTCCAAAGTCGGCCAGCTGCTGGCTACCCAACTCCTGGAGTTGTGCCCATGGGTGGCCAGGGAGAGCTGCAGAAACTCATGCAGACTATGAACATGAATCCAGCACAACCGGCAGGGAGCACTGTTCACCATCCACCATCTGGTTTCTATATGATGGGACAAGTTTCTCCAGTTAACGGTATGGTGACAACTGGAGTGAGCGTGAGTAAGCCTCAGTCAGCAGCTCCTGTATCATCAACCTCGTCACAGTCGGCGAAGGATCATGATTTTTCCTCTTTAACACAAGGGATGTTTACCAAACATTGA 1734 0.4429 MKNGLRYVLIDVQGEKENGADNKSQEWYLDCDLSCSSSLVLVALQSKTSSEGERKDKEREKTNLAIESIFIFLSLASISFFFFLLCFCFCCFLRLTMNQKANVSKELNAKHRKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWESELPPHYDRVGIENFIRAKYEEKRWVPRDGKPKSPSRLQEDKASSHWQRPAERSGHVSNASASENTFEERKKIDPTNTITATRISVPAPPKGPDQVTPVTKPQHVEKVESVASQPQAETSKQATDMAQNTPTKVDYATDLFNMLSMNEPNENGSEAADATADDNNWAGFQSAAEASTAEKTGPTKAVDGTSPSASGIEDLFKDSPLLAPSLVPEKPQKDVKNDIMSLFEKSSIVSPFSMHQQQIAMLAQQQSLLMAAAAKSAGWDPKNPGSLQQFGLNGSNIPVQSRPAAGYPTPGVVPMGGQGELQKLMQTMNMNPAQPAGSTVHHPPSGFYMMGQVSPVNGMVTTGVSVSKPQSAAPVSSTSSQSAKDHDFSSLTQGMFTKH 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1099 577 Pfam Putative GTPase activating protein for Arf 113 219 IPR001164 GO:0005096
Glsi14g1099 577 Gene3D Arf GTPase activating protein 94 225 IPR038508 -
Glsi14g1099 577 PRINTS HIV Rev interacting protein signature 143 160 IPR001164 GO:0005096
Glsi14g1099 577 PRINTS HIV Rev interacting protein signature 124 143 IPR001164 GO:0005096
Glsi14g1099 577 PRINTS HIV Rev interacting protein signature 164 185 IPR001164 GO:0005096
Glsi14g1099 577 ProSiteProfiles ARF GTPase-activating proteins domain profile. 112 226 IPR001164 GO:0005096
Glsi14g1099 577 MobiDBLite consensus disorder prediction 366 384 - -
Glsi14g1099 577 SMART arf_gap_3 112 226 IPR001164 GO:0005096
Glsi14g1099 577 CDD ArfGap 115 213 - -
Glsi14g1099 577 MobiDBLite consensus disorder prediction 219 242 - -
Glsi14g1099 577 SUPERFAMILY ArfGap/RecO-like zinc finger 111 220 IPR037278 -
Glsi14g1099 577 MobiDBLite consensus disorder prediction 366 393 - -
Glsi14g1099 577 MobiDBLite consensus disorder prediction 219 323 - -
Glsi14g1099 577 MobiDBLite consensus disorder prediction 300 323 - -
Glsi14g1099 577 MobiDBLite consensus disorder prediction 544 577 - -
Glsi14g1099 577 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 97 577 IPR044520 GO:0005096
Glsi14g1099 577 FunFam stromal membrane-associated protein 1 isoform X1 97 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1099 Glsi-ChrGlsi14 11969125 11975874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1099 98 219 C2H2 Transcription Factor Family AT4G05330 46.154 9.00e-29 115