Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1095 ATGAATACAGATATATTTTCAGCAGAGTTGAGACCATTTCTGGATGTATTTTCTCGTCCAACGGACTCGCTTGAGAGCTTGAATTACAAGATGATAGAGAGGATTGGAGCTGGCAGATTCGGTGAAGTTTTTAAGTGCCTGAAACGTGAGACTAATGAGATTGTAGCGGTCAAGATTATCCCCATTTCGGAAAAAGATGAACTAGATGGCATTCCAAGCTCAATTATAAGAGAAGCCTCTGTTCTTAGAGAGTTGGACCATGTCAACATTGTGAGGTTGCTGGATGTGCTGCATAGGGGTCATGAAGTATTTTTGGTCTTTGAGTATCTTGAGCTTGATCTACTTAAATTCATGAAAGGATCAAATACTCCTATGCAACCTATGCTAATAAAAAATTTTCTGCATCAAATACTTTCCGGTGTAGCACATTGCCATTCTCACAAAATTCTTCAGAGAGATTTGAAGCCTCAGAATTTGCTGGTTGATGTTACTAACAAAGTGGTAAAGTTAGCAGACTTTGGTTGTGCGAGGGCATTTGGATCAGTTCCTCTTCCGTCATATACTAGCGATGTGGGCAGTGAGTGGTACAAGGCCCCTGAACTATTGTTAGGCTTCGACATACACTCGACTGCGGCGGATGTCTGGTCTGTGGGTTGTATCTTCGGTGAGATGGTTGATGGCAACCCTCTGTTCGCTGATGAAAGTGGAGTCAGTGTATTACCTAAAATATTTCGCTTGCTTGGAACCCCAACGGAAGAAACCTGGCCTGGATTGGGAAGTTTCCTTGGAGCCCCAACATCGCCTGGATCGAGTCCTTTCAAAATTGACGGTACTTCAGCCAAGCCGAAGAAAATGCTTTGCCTGTATCCAAATGATAGAATTTCAGCGGAAGATGCTCTTGAGCACTCATATTTCGATGATTTGAAGAAGACTACTGAGGCCAGAGGAGAAGGACAATCGGACAGTGGTTGCAATGCTGAGATTTTGGTTCTCAGTTATAAGAAATTTTCAGCTTCTGTAATTCGCAATCTTGGCCTTCGGGCTAAGATCAAGCATAGCTTCCATATTCGCTTTTTTGGAAGGATAGACAATTGGACATTACTCATCCTATACGCTGAAAACCTCGATGAAATTAGAGGGGAAAACAAAGTGAGAAACCAACCCAGTAAGCGTCTCTACAATCGTATCATGGAGGAGCAGGCTTCATCATCCAAGACTGCAGATCTGGATGCTCCCCTCCACGCAATTGGGTTCGAAATCGATGACATGTCGCCCCACAGGGTCACCGGCCGTCTTCCTGTTACCCTCAAGAGCTGTCAGGGATTCAAGGTTTTGCATGGAGGCGTTTCAGCTCTGATAGCCGAGGGCCTTGCAAGCCTTGGAGCCCACATGGCCTGTGGTTTTCAAAGGATAGCTGGAATTCAACTGAGCACCAACCATATGAAACCTGCTGTACTGGGTGACCTTGTTTATGCTGAAGCTACCCCTATCAATATTGGAAAAACCATTCAGGTGTGGGAGGTGCGACTTTGGAAGACTGATCCTTCAAAGTCGAAGGACAAAGTCTTGGTCTCATCTTCTAGAGTTACTCTTGTATGCAATATTCCTATACCTGAGCATGCAAAAGCTAATGTTGAAAAGGTTAAGAAGTATGCGAAGCTGTGA 1665 0.442 MNTDIFSAELRPFLDVFSRPTDSLESLNYKMIERIGAGRFGEVFKCLKRETNEIVAVKIIPISEKDELDGIPSSIIREASVLRELDHVNIVRLLDVLHRGHEVFLVFEYLELDLLKFMKGSNTPMQPMLIKNFLHQILSGVAHCHSHKILQRDLKPQNLLVDVTNKVVKLADFGCARAFGSVPLPSYTSDVGSEWYKAPELLLGFDIHSTAADVWSVGCIFGEMVDGNPLFADESGVSVLPKIFRLLGTPTEETWPGLGSFLGAPTSPGSSPFKIDGTSAKPKKMLCLYPNDRISAEDALEHSYFDDLKKTTEARGEGQSDSGCNAEILVLSYKKFSASVIRNLGLRAKIKHSFHIRFFGRIDNWTLLILYAENLDEIRGENKVRNQPSKRLYNRIMEEQASSSKTADLDAPLHAIGFEIDDMSPHRVTGRLPVTLKSCQGFKVLHGGVSALIAEGLASLGAHMACGFQRIAGIQLSTNHMKPAVLGDLVYAEATPINIGKTIQVWEVRLWKTDPSKSKDKVLVSSSRVTLVCNIPIPEHAKANVEKVKKYAKL 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1095 554 Gene3D Hotdog Thioesterase 397 534 - -
Glsi14g1095 554 Pfam Thioesterase superfamily 443 515 IPR006683 -
Glsi14g1095 554 Gene3D Phosphorylase Kinase; domain 1 22 111 - -
Glsi14g1095 554 NCBIfam hotdog fold thioesterase 414 510 IPR003736 -
Glsi14g1095 554 ProSiteProfiles Protein kinase domain profile. 29 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1095 554 FunFam 14-dihydroxy-2-naphthoyl-CoA thioesterase 1 399 534 - -
Glsi14g1095 554 ProSitePatterns Protein kinases ATP-binding region signature. 35 58 IPR017441 GO:0005524
Glsi14g1095 554 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 408 532 IPR029069 -
Glsi14g1095 554 Pfam Protein kinase domain 29 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1095 554 SUPERFAMILY Protein kinase-like (PK-like) 28 308 IPR011009 -
Glsi14g1095 554 PANTHER CELL DIVISION PROTEIN KINASE 28 307 - -
Glsi14g1095 554 CDD PaaI_thioesterase 415 530 - -
Glsi14g1095 554 Gene3D Transferase(Phosphotransferase) domain 1 112 327 - -
Glsi14g1095 554 SMART serkin_6 29 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1095 Glsi-ChrGlsi14 11946675 11951929 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1095 28 308 Core Cell Cycle Gene Families AT3G48750 47.119 2.94e-85 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Glsi14g1095 Pkinase 1.5e-63 CL0016