Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1086 ATGGAGAGCACCGACTCATCGACCGGTTCGCAGCAACCCAACCTGCCACCCGGGTTCCGGTTCCACCCCACCGACGAGGAGCTTGTGGTGCACTACCTCAAGAAGAAGGCCTCCTCTGCTCCTCTCCCTGTAGCGATCATCGCGGAGGTCGACCTTTACAAGTTTGACCCATGGGAGCTCCCAGCTAAGGCAGCGTTTGGGGAGCAAGAGTGGTATTTCTTTAGCCCCAGGGACAGGAAGTATCCGAACGGTGCCAGGCCAAACAGGGCTGCAACTTCTGGGTATTGGAAGGCTACGGGGACTGATAAGCCGGTGTTGAGCTCCAATGGAACCCAGAAGGTTGGGGTGAAGAAAGCTTTGGTCTTCTATGGAGGGAAGCCCCCAAGAGGCATCAAAACCAATTGGATCATGCATGAGTACCGACTTGCTGATAATAAGCCTAATAATAAGCCTCCTGGGTGTGACTTGGGCAACAAGAAAAACTCTCTACGGCTGGACGACTGGGTGTTGTGCCGAATCTACCAGAAGAACAATACACATAGATCACCTATAGACCACGAAAGGGATGATTGTATGGATGATATGCTTGGAGGGATACCTCCTTCAATCAACGTGGGCCAAATGAATGCAAAGTTTCACCTTTCAAAGATGTCCACAAGCACCTATACTAGTGGTGCATTGCTGCAGGAAACTGACCAAAACTTACTGGAAGGGATCATTATGGGCAATGGTGGGATCAGCACAAGTGCCTCTAAGGCAGATCAGTTCCCTGTTATCCCAACTATGACTGCCTCTAATCCCAAAAGAACACTCTCATCGCTGTTTTGGAATGAAGAGGATGTGGCTGGAACCTCATCCACCAAACGGTTGGGTTTGGAAGATGGAGATGGCAGGATGGATCATGATCAGAATGGTACTGCTAGTTCTATAGCCAACCTGTTTAACCAACTCCCTCAAACCCCTTCCTTGCACCACCAGACAATGCTGGGTTCTTTAGGAGATGGCCTCCTTCGCACATCATATCCAATACCTGGAATGAATTGGTATGGAAAGCAGTCAAGCTCAATTGGCATTTGCTTGATGTCAAATTTGGCACTGACCCACCTCAGGACTTTAAGGAGTCCTTCCCTCATCTTCTCTTCCTTGACCCGTCCTGGGTATAAGTCGACTAGTTTTTCTGAACCCAAAACCGGAGTTCTCTGGAAATACAGTGCTACCCACTTCCTTCGTATTCATAGCTTAAGAGAAATGCAGAGTGCCCTTCAGAAGCAGAGACAAGAAAACCCACAGATTCTACTGAAGTTATCGGTCACCGTGGGCAAGATAGAACAAGAGCTCAGCCTTGGTCGTAAAAATGGTTACTTGGCCATGTCCCCGAGGTCCCGCCCGGCCTGCACATGCTCGAACCGGCCCGGTTCTGTCCGGTGTGCGCGTCATGGATATTTAGTGCCGGGGGAGAGGTTGAAGAAGCGTCCGGCGAGCAAAGAGATCTTGAGGAGGGCACTGACGCCGCCGCCACGGCGATTAGGCCTTAGATGGTTAAATTTCCGTCCAACTCCAAGCAGGCTCTCTAACATGTCCATGGCTTAA 1590 0.5044 MESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVAIIAEVDLYKFDPWELPAKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLSSNGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNKPPGCDLGNKKNSLRLDDWVLCRIYQKNNTHRSPIDHERDDCMDDMLGGIPPSINVGQMNAKFHLSKMSTSTYTSGALLQETDQNLLEGIIMGNGGISTSASKADQFPVIPTMTASNPKRTLSSLFWNEEDVAGTSSTKRLGLEDGDGRMDHDQNGTASSIANLFNQLPQTPSLHHQTMLGSLGDGLLRTSYPIPGMNWYGKQSSSIGICLMSNLALTHLRTLRSPSLIFSSLTRPGYKSTSFSEPKTGVLWKYSATHFLRIHSLREMQSALQKQRQENPQILLKLSVTVGKIEQELSLGRKNGYLAMSPRSRPACTCSNRPGSVRCARHGYLVPGERLKKRPASKEILRRALTPPPRRLGLRWLNFRPTPSRLSNMSMA 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1086 529 FunFam NAC transcription factor 56 24 181 - -
Glsi14g1086 529 MobiDBLite consensus disorder prediction 1 20 - -
Glsi14g1086 529 MobiDBLite consensus disorder prediction 1 17 - -
Glsi14g1086 529 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Glsi14g1086 529 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Glsi14g1086 529 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Glsi14g1086 529 PANTHER NAC TRANSCRIPTION FACTOR 56 15 206 - -
Glsi14g1086 529 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1086 Glsi-ChrGlsi14 11895356 11901479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1086 1 349 NAC Transcription Factor Family AT3G15510 54.907 3.06e-122 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi14g1086 NAM 1.5e-39 No_clan