Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1063 ATGGCTGAGCTCACAGATTCGTTCAAATTAGACTTCGGGGGTAATAATTTGCTGCAAACGTACCAGTACACAATCACCTTCGATCTTCCAACTACAATCGTCATCGTCTTCACAATCTCACTCTTCTTCTGCATTTTCTACCACATTCTCCATGCCTTGTTTTACTGGCTCATCAAAATTAGGCCTTACCTACGAGATGTAGAAGAAGGACCTCATCCCCCTCCACCCTCTGCTTATAATACTCTCTCTGATTCTGAGTCTGATCAAGAGCACCATGTGGCCATCTTTGAAGCTCTGGTTCATAGCAACATGCAGGCTTGGTTAATGGTGGGGGCGTTAATGGAAGGAGTTATTGTTGTTGATGAAAACCGGGGGCAAATGCTTAGAGCTTCCAAGAAGTTGCCTCCGTTGGTGAGCTATGGAAGCCATGATCATGGGAAGAGATGCACTAGTGACTGTGCCATTTGCTTGGAGGAATTTAAAGTTAGTGATGAGTGTCAGGCTGTGCTAAATGGTCTGTCTCAGACTAAATTGGACCTGATTACAATAGCAAAAGACGAATTTGATTTTCTAGAAGATGAATTTGATGTTGATATTGCCCCACCTGATGATCATTGGGGAGGTGAGTTTTCAGAGAGATTATTTTCCAGACGCCAGAGGGAAAGAAAATTAAGGAAACTCAGGGCTTCTGTTGATCGTTTTGGAAGCAAAGCAATAGCTGCAAGTTTTAGAGACTGTGCAATTTGCTTAGAGGAATTCCGGAAAGGGGACGAATGCCTGGTTTTTCCTGTTTGCAGCCATCTTTTTCATTCCAAGTGTATCTTCCGTTGGTTTGAGAGGAGTCTGACTTGTCCAATTTGTCGGCATTGTATCTTCCCAATCAAAAAGGCGGAAAGTGTTACACCAATTAGAAGGTCATCACTGTCACTATGGGATTCTATTTACTGTCCCTATGTTTTTTTTTTTGAGACAGAACGTCGCTATGTTTTTCTGTAG 996 0.4267 MAELTDSFKLDFGGNNLLQTYQYTITFDLPTTIVIVFTISLFFCIFYHILHALFYWLIKIRPYLRDVEEGPHPPPPSAYNTLSDSESDQEHHVAIFEALVHSNMQAWLMVGALMEGVIVVDENRGQMLRASKKLPPLVSYGSHDHGKRCTSDCAICLEEFKVSDECQAVLNGLSQTKLDLITIAKDEFDFLEDEFDVDIAPPDDHWGGEFSERLFSRRQRERKLRKLRASVDRFGSKAIAASFRDCAICLEEFRKGDECLVFPVCSHLFHSKCIFRWFERSLTCPICRHCIFPIKKAESVTPIRRSSLSLWDSIYCPYVFFFETERRYVFL 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1063 331 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 239 302 - -
Glsi14g1063 331 CDD RING-H2_PA-TM-RING 245 288 - -
Glsi14g1063 331 Pfam Ring finger domain 245 288 IPR001841 -
Glsi14g1063 331 ProSiteProfiles Zinc finger RING-type profile. 246 288 IPR001841 -
Glsi14g1063 331 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 211 293 IPR013083 -
Glsi14g1063 331 SUPERFAMILY RING/U-box 245 295 - -
Glsi14g1063 331 SMART ring_2 246 287 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1063 244 288 C3H Transcription Factor Family AT1G53010 53.333 8.67e-12 61.2