Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1059 ATGTCGGTTCTGCGGGAGAGGTTTGGTGTGCATATTGGGTTACCTCTGTTGCAAGCCCTTTGCATTGAGGATAGTAAGGAGAGCCCAAGGGATCGTTTTTCCGGCAAGGCTTCATTGGAGTCGTACGTATCTAGGGCTACTTCATCAATTGATAAGCAAGGTAATGGCTCTGTTCGATTGCAAGGTGATAACTTCGAAAGGAAGAGGGAGAAAATAGAATACAGCGTTGCTCAACATCCGACAATTGGTAGTGTTCCGAAAGCCACAGAGGGGGAGCATGTAGCAGCTGGATGGCCCTCGTGGCTGGCAGCAGTGGCTGGAGAGGCTATCAAGGGATGGTTGCCACGCCGTGCAGTTTCTTTTGAAAGTTGGATAAATGATGGCAATGTGGAAAACGAGGCGCTGGCTTCCCCGCTACCTCGTTTGATTGTCAGTGTAATAAATGCCAAGATCGTGGGCTTGGTTCTCTTAACACGAATCTGTGCACTTCCATCAAATAATTGGCCTAGATTACATATTCTTTGCCCAACTAGTAATGATCGAATGCGACATGCTCATGATGTTGTCCTTCATTATCTACTGCCCCATGTTGTTAAAAATGTTAATGCTAAGATTGGCCAGGGAACTTATAGCAATGTTTATAGCGCTCCTGATCTTGACCAAAAGAAAATTGTTGCTTTAAAGAAAGTGAGGTTTGATAATCTTGAGCTTGAGAGTGTTCGATTCATGGCAAGGGAAATTCACATTCTGCGTAGACTTGATCATCCAAATGTCGTAAAACTGGAAGGCTTTGTTACACGAAGGATGTCTTGCAGCTTCCACTTACTATGGTACTCGGTAGATTTATGGAATACAGGTTGCATGCTTGCTGATCTGTATGCTGGCAAGCCTATTATGCTTGGAAGAACTGAGGTTGAGCAGTTACATAAGATTTTTAAACTTTGTGGTTCACCTTCGGAGGATTATTGGAGAAAATCAAAGTTGCCTCATGCAACGATATTTAAGCCCCAACAGCCCTATAGGCAGTGTGTTGAAGAAACATTTAAGGACTTTCCTGCGCCTGCATTAGCCCTCATGGAGACACTTTTGTCCATAGATCCTGCTGATCGTGGAACTGCAGCATCTATTTTGAAACGCGAAGTTGCTGCTAGGAATATGTTGTCTGATGATGGAAGAGAAAGGTATGGATCATCACAAGTGGAGTCTCCAAAACTAATAAGTAGGTTCCCAGGATCCTTCGAGGGGGCCTCTGAGTCATTGATGCAACAGGATCAAAAGCATCACATACAAGGCCCTATGGATCCTCCTTAA 1311 0.4439 MSVLRERFGVHIGLPLLQALCIEDSKESPRDRFSGKASLESYVSRATSSIDKQGNGSVRLQGDNFERKREKIEYSVAQHPTIGSVPKATEGEHVAAGWPSWLAAVAGEAIKGWLPRRAVSFESWINDGNVENEALASPLPRLIVSVINAKIVGLVLLTRICALPSNNWPRLHILCPTSNDRMRHAHDVVLHYLLPHVVKNVNAKIGQGTYSNVYSAPDLDQKKIVALKKVRFDNLELESVRFMAREIHILRRLDHPNVVKLEGFVTRRMSCSFHLLWYSVDLWNTGCMLADLYAGKPIMLGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQPYRQCVEETFKDFPAPALALMETLLSIDPADRGTAASILKREVAARNMLSDDGRERYGSSQVESPKLISRFPGSFEGASESLMQQDQKHHIQGPMDPP 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1059 436 PANTHER CELL DIVISION PROTEIN KINASE 279 382 - -
Glsi14g1059 436 Gene3D Transferase(Phosphotransferase) domain 1 278 383 - -
Glsi14g1059 436 ProSitePatterns Protein kinases ATP-binding region signature. 205 228 IPR017441 GO:0005524
Glsi14g1059 436 ProSiteProfiles Protein kinase domain profile. 199 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1059 436 MobiDBLite consensus disorder prediction 411 436 - -
Glsi14g1059 436 SUPERFAMILY Protein kinase-like (PK-like) 203 378 IPR011009 -
Glsi14g1059 436 Pfam Protein kinase domain 202 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1059 436 SMART serkin_6 199 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1059 436 Gene3D Phosphorylase Kinase; domain 1 199 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1059 Glsi-ChrGlsi14 11652911 11658023 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1059 279 380 Core Cell Cycle Gene Families AT5G10270 45.631 1.66e-21 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Glsi14g1059 Pkinase 3.6e-12 CL0016