Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1045 ATGACACATGGCATGTGCATGATTGACCTTGATCTGGTATGGGAAACTATGATCGAAGAATTAATCCGTGCATGGAAAAGTCTACGAGAAAAGCTTCAGTTTCCACAGCTCTCTCCCCTGAATTTTCTCCTCCTTCCCAATTTCCTCATGGAGTTTCACAGGCTAATCGTCCTCTTCTTGGTTCTTTTTAGTCTTCTATCTCACTCCCAAGCCAACAAATTCTATGTTGGAGGAAGAGATGGTTGGGTCTTGAACCCTTCTGAGGATTATAATCAGTGGGCTGGAAGGAACAGATTCAAAGTCAATGACATGCTGGTGTTTAAGTACAAGAAGGGTTCGGACTCGGTGCTGGAGGTGAACAAGGACGATTACGACAAGTGCAACACGAAGAATCCAATCAAGAAATTTGAAGATGGTGACACACAGTTCACGTTTGATCGATCGGGACCTTTCTTCTTCATCAGTGGAGAAGGTGGAAATTGTGGAAAGGGTCAGAAATTATCTATTGTGGTCTTGTCTGTGAGAGGTCCCTCTGTTCCCACTCCTCCGAAGGCTCCTTCCCCTGTTTCTCAACCCCCCTCTGTTCCTACTCCTCCGAAGGCTCCTTCCCCTGTTTCTCAACCTCCCTCTGCTCCTACTCCTCCGAAAGCTCCTTCTCCTGCAGGGAACGCCCCAGTTTCACCATTTCCCAAGACTCCAGGTGGGTCTCCGGTGACCACACCCACCACGCCGTCCCCGGCGGGTAATCCTTCGTCCTCCCCTGTTTCACCATCTCCTGGTGGTAAATCTCCATCAACATCACCGTACCCACCGTCTCAGGCACCGGGAGGATCTCACACAACGCCATCTCCGATGAGCAGCCCTCCAGTAAATGCACCTGGATACGTATCTCCGTTTGGTAGTCCACCATCTCAGGCACCGGGAGGATCTCACACGACGCCGTCTCCGATGAGCAGCCCTCCGGCGAATGCACCTGGATACCTATCTCCGTTTGGTAGTCCACCATCTCAGGCACCGGGAGGGTCTCCCACAACGCCGTCTCCGGTGAGCAGTCCTCCAGCAGTTTCAGAGGCGCCTGCCAATGCACCTGGGTTCTCTTCGCCGGCGACTGCTCCGTCGCCAGCTACGACAACACCCGTATCACCATCAGCCAATTCTCCAGCTTCTACCCCAACATCATCATCGTCTCCTTCAACCTCGCCTCCGGCATCATCGCCTTCACCTCCGGCAACCACTCCCTCGCCATCATCGTCGACCCCGGGATCATCTGAAACGCCGACGGAAGGCCCCGGAGCTTCACCACTATCACCTTCGTCATCAAATGAAACGGCACCGTCCCCAGCAGGATCGTCAGCATGGATTGTAACTCCTTCAAGCTCAATTACAGTTACTATTATGGTCGGTGCCGCTCTTTGCATTATTTTTGGTGCCTGGTAG 1437 0.5261 MTHGMCMIDLDLVWETMIEELIRAWKSLREKLQFPQLSPLNFLLLPNFLMEFHRLIVLFLVLFSLLSHSQANKFYVGGRDGWVLNPSEDYNQWAGRNRFKVNDMLVFKYKKGSDSVLEVNKDDYDKCNTKNPIKKFEDGDTQFTFDRSGPFFFISGEGGNCGKGQKLSIVVLSVRGPSVPTPPKAPSPVSQPPSVPTPPKAPSPVSQPPSAPTPPKAPSPAGNAPVSPFPKTPGGSPVTTPTTPSPAGNPSSSPVSPSPGGKSPSTSPYPPSQAPGGSHTTPSPMSSPPVNAPGYVSPFGSPPSQAPGGSHTTPSPMSSPPANAPGYLSPFGSPPSQAPGGSPTTPSPVSSPPAVSEAPANAPGFSSPATAPSPATTTPVSPSANSPASTPTSSSSPSTSPPASSPSPPATTPSPSSSTPGSSETPTEGPGASPLSPSSSNETAPSPAGSSAWIVTPSSSITVTIMVGAALCIIFGAW 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1045 478 PANTHER BLUE COPPER PROTEIN 73 249 IPR039391 GO:0009055
Glsi14g1045 478 MobiDBLite consensus disorder prediction 303 317 - -
Glsi14g1045 478 ProSiteProfiles Phytocyanin domain profile. 72 173 IPR003245 GO:0009055
Glsi14g1045 478 MobiDBLite consensus disorder prediction 336 353 - -
Glsi14g1045 478 Gene3D - 70 175 IPR008972 -
Glsi14g1045 478 MobiDBLite consensus disorder prediction 261 277 - -
Glsi14g1045 478 Pfam Plastocyanin-like domain 82 165 IPR003245 GO:0009055
Glsi14g1045 478 MobiDBLite consensus disorder prediction 177 454 - -
Glsi14g1045 478 MobiDBLite consensus disorder prediction 179 253 - -
Glsi14g1045 478 MobiDBLite consensus disorder prediction 416 454 - -
Glsi14g1045 478 MobiDBLite consensus disorder prediction 401 415 - -
Glsi14g1045 478 MobiDBLite consensus disorder prediction 366 400 - -
Glsi14g1045 478 FunFam Early nodulin-like protein 1 71 176 - -
Glsi14g1045 478 CDD OsENODL1_like 73 172 IPR041846 -
Glsi14g1045 478 SUPERFAMILY Cupredoxins 71 172 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1045 Glsi-ChrGlsi14 11538613 11541533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1045 49 307 Phytocyanin Superfamily AT4G27520 45.070 6.50e-55 185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1045 14 11538613 11541533 Glsi14g1045 14 11538613 11541533 ECH