Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1034 ATGGTGCTGCTCAGATGTTTCCCCTGGACTTTTTTCGAATGGGGGTTCTTGGCTTGCTTTCTTTGCCTATCTCTGGGTCTTAAAACCCCAGCCCCATCTTGTGACCCACGTGATCTATTGGCCCTGAAGCAATTTGCAGGAAACCTTACAAATGGTTCTATCATCACAGCCTGGTCCGATGATGTTGGCTGTTGCAAATGGATTGGAGTTGTCTGTCATAATGTGACTAATGGGACTGCTGGTAGTAGAGTGACGAGGTTGATTCTGCCAAAAATGGGTCTCAAGGGGACAATCTCACGCTCTCTAGCATTACTAGATCGGCTAAATATGCTGGATCTTTCATTCAATTATCTCCAAGGTCAATTGCCGGCAGAGTTCTCCCAATTGAAGCTGTTGGAATTTGTTGACTTGAGCCATAATGTGCTGTCAGGACCCGTTTCTTGGGCTCTTTCTGGTCTTCAATCCATTCGGATACTGAATATTTCTAGCAATTCATTTGTTGGAAATCTCTCCCAGCTTGGGGAATTCCCACATATCCTTGCATTAAATATAAGCAACAATTCATTCACCGGAGGGTTCAGTTCTCAAATTTGCAGTTCCTCTGAGGGGCTTCATGTTCTTGATTTATCAGCAAATAATTTTGGTGGTGCTCTTGAAGACTTGGATAATTGCAGCATATCTCTCAAACAGTTGCATTTGGATTTCAATTTATTTTCAGGCTTTCTTCCAGATTCTATATATTCAATATTGGCCTTGGAGCAACTCTCAATCTCTGCCAACAATTTCTCTGGCCAGTTAAGCAAGAAACTAAGTAAGCTTTCTAGCCTAAAATCTCTTATAATTTCTGGAAACCACTTTTCTGGAAAACTCCCTGATGTGTTTGGGAACCTTTCTCATCTAGAACAACTAATAGCCCATTCTAATTCGTTCTCTGGACCATTGCCATCCACCCTGGCTATATGCTCAAAGCTTAGGGTGCTTGATCTACGCAATAATTCTCTGACAGGTCCTTTTGATCTTAATTTCACTGGGTTGCCTAATCTTTGCACACTTGATCTTGCTACTAATCATTTGAATGGGTCCCTTCCCAATTCCTTGTCCTATTGCCGTGAATTGAGAGTTTTGAGCCTTGCTAAGAATGAGTTAACTGGCTCCATCCCTGAGAGCTATGCAAACCTCACTTCACTTGTGTTTCTTTCCTTGTCAAACAATAGCTTACAGAACTTATCCGGGGCACTCTCTGTGCTGCAGCAGTGCAAAAATCTCACCACTCTTATCCTCACAAAGAATTTTCATGGTGAGAAAATCCCAGAAAGTGTAAGAGGTTTTGAGAGCCTTATGATCTTAGCACTTGGAAATTGTGGTCTTAAAGGCCAAATCCCTGTTTGGCTATTGGAATGCAAGAAATTGCAGGTCCTTGATTTGTCTTGGAACCATTTGGAAGGTGGCATCCCTTCTTGGATTGGTTGGATGGACAATTTGTTCTACTTGGATTTCTCAAATAATTCTCTCACCGGAGATATACCGAAAAGTTTATCTGCTTTGGGGAGCCTCATATCCTCAAATTTCAGTAGATCAAGTCTTGCTGCATCTGCAGGTATTCCTCTCTATATCAAAAGAAACAAGAGTGCTAGTGGGCTGCCTTATAACCAGGCCTCAAGTTTCCCTCCTTCTATTTTCTTGAGCAATAACAGATTAAGTGGAATAATATGGCCTGACATTGGGCAATTGAAAGCACTGCATGTCTTAGATTTAAGCAGGAACAACATCACCGGTACCATTCCAAGCTCTATTTCAGATATGGACAACTTGGAAACATTAGATTTGTCAAATAACAATCTCTATGGAACAATCCCTCCATCATTTAACAAGCTCACGTTCCTATCAAAGTTCAGTGTGGCATATAATCACTTGGAGGGACCAATTCCGACAGGGGGACAGTTTCTGAGCTTTCCTAGTTCAAGCTTTGAGGGCAACCTAGGACTTTGTAGGGACATAGATATCCCTTGCAAAATGGTCAACGATATGGGGTTGAGGCCCCATATTGCTTCTGGTTCCGCCAGCAAATATGGCAGAAGCAATGTCCTTGGCATAACAGTTAGTATAGGTATAGGGCTTGCAGTGCTTCTTGCAATTATTCTGCTAAAATTATCAAAGAGGGATGATGGTAAGCCAATTGATAACTTTGACGAGGAACTTAGCAGGCCACACAGGTTTTCTGAAGCCCCTGTTTCCTCAAAATTGGTACTTTTTCAGAATTCAGATTGCAAGGATCTCACAGTTGGAGATTTGTTAAAATCCACAAACAATTTCAACCCTGAAAACATAATCGGTTGTGGTGGGTTTGGTCTTGTCTACAAGGCAATTTTTCCAAATGGCACAAAAGCAGCTATCAAGAGGCTTTCTGGGGATTGTGGTCAGATGGAGCGTGAATTCCAGGCTGAAGTTGAGGCCCTCTCAAGAGCTCAGCACAAGAACCTTGTTTCCCTTAAAGGATATTGCCAGCATGGCAATGATAGATTGTTGATTTACTCCTACATGGAGAATGGAAGCTTGGATTATTGGCTGCATGAGAATGAGGATGGAAATTCAGTTCTAAAGTGGGATGTAAGACTCGAGATTGCACGAGGCGCAGCTCGCGGATTAGCATACTTGCACAAGGGCTGTGAACCATGTATAGTTCATCGAGATGTTAAGTCTAGCAATATACTTTTGGATGATAAATTTGAAGCTCATTTAGCTGATTTTGGTCTCTCACGGCTACTCCAACCCTATGATACTCATGTCACAACAGATTTAGTAGGAACTTTAGGATATATTCCTCCAGAATACAGTCAGACATTAACAGCAACCTTCAGGGGTGATGTTTATAGTTTTGGTGTTGTTCTTGTTGAGCTTCTTACAGGAAGAAGACCTGTAGAAGTCATGAAGGGGAAAAATTGCAGGAATCTGGTGTCTTGGGTGTTTCAGATGAAATCTGAGAATAGGGAGCTGGAGATTTTTGATTCCGCCATTTGGCACAAGGATCATGAGAAACAGCTCTTGGAGGTGCTTTCCGTTGCTGGTAGATGTCTAGACCAAGTTCCAAGGCAAAGACCCTGTATTGAAGAAGTTGTTTCATGGCTTGATGGTTTAGGATTTGAAGGTTCTCAACATTGA 3159 0.4204 MVLLRCFPWTFFEWGFLACFLCLSLGLKTPAPSCDPRDLLALKQFAGNLTNGSIITAWSDDVGCCKWIGVVCHNVTNGTAGSRVTRLILPKMGLKGTISRSLALLDRLNMLDLSFNYLQGQLPAEFSQLKLLEFVDLSHNVLSGPVSWALSGLQSIRILNISSNSFVGNLSQLGEFPHILALNISNNSFTGGFSSQICSSSEGLHVLDLSANNFGGALEDLDNCSISLKQLHLDFNLFSGFLPDSIYSILALEQLSISANNFSGQLSKKLSKLSSLKSLIISGNHFSGKLPDVFGNLSHLEQLIAHSNSFSGPLPSTLAICSKLRVLDLRNNSLTGPFDLNFTGLPNLCTLDLATNHLNGSLPNSLSYCRELRVLSLAKNELTGSIPESYANLTSLVFLSLSNNSLQNLSGALSVLQQCKNLTTLILTKNFHGEKIPESVRGFESLMILALGNCGLKGQIPVWLLECKKLQVLDLSWNHLEGGIPSWIGWMDNLFYLDFSNNSLTGDIPKSLSALGSLISSNFSRSSLAASAGIPLYIKRNKSASGLPYNQASSFPPSIFLSNNRLSGIIWPDIGQLKALHVLDLSRNNITGTIPSSISDMDNLETLDLSNNNLYGTIPPSFNKLTFLSKFSVAYNHLEGPIPTGGQFLSFPSSSFEGNLGLCRDIDIPCKMVNDMGLRPHIASGSASKYGRSNVLGITVSIGIGLAVLLAIILLKLSKRDDGKPIDNFDEELSRPHRFSEAPVSSKLVLFQNSDCKDLTVGDLLKSTNNFNPENIIGCGGFGLVYKAIFPNGTKAAIKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLKGYCQHGNDRLLIYSYMENGSLDYWLHENEDGNSVLKWDVRLEIARGAARGLAYLHKGCEPCIVHRDVKSSNILLDDKFEAHLADFGLSRLLQPYDTHVTTDLVGTLGYIPPEYSQTLTATFRGDVYSFGVVLVELLTGRRPVEVMKGKNCRNLVSWVFQMKSENRELEIFDSAIWHKDHEKQLLEVLSVAGRCLDQVPRQRPCIEEVVSWLDGLGFEGSQH 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1034 1052 Pfam Leucine rich repeat 323 382 IPR001611 GO:0005515
Glsi14g1034 1052 Pfam Leucine rich repeat 559 614 IPR001611 GO:0005515
Glsi14g1034 1052 Pfam Leucine Rich Repeat 469 488 IPR001611 GO:0005515
Glsi14g1034 1052 SUPERFAMILY L domain-like 309 663 - -
Glsi14g1034 1052 SMART serkin_6 771 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1034 1052 FunFam Tyrosine-sulfated glycopeptide receptor 1 342 675 - -
Glsi14g1034 1052 Gene3D Ribonuclease Inhibitor 168 266 IPR032675 -
Glsi14g1034 1052 Gene3D Ribonuclease Inhibitor 267 365 IPR032675 -
Glsi14g1034 1052 SUPERFAMILY L domain-like 34 315 - -
Glsi14g1034 1052 FunFam Leucine-rich repeat receptor-like protein kinase 847 1051 - -
Glsi14g1034 1052 FunFam Phytosulfokine receptor 1 734 846 - -
Glsi14g1034 1052 SMART LRR_typ_2 345 369 IPR003591 -
Glsi14g1034 1052 SMART LRR_typ_2 393 416 IPR003591 -
Glsi14g1034 1052 SMART LRR_typ_2 491 515 IPR003591 -
Glsi14g1034 1052 SMART LRR_typ_2 105 129 IPR003591 -
Glsi14g1034 1052 SMART LRR_typ_2 273 296 IPR003591 -
Glsi14g1034 1052 SMART LRR_typ_2 601 624 IPR003591 -
Glsi14g1034 1052 SMART LRR_typ_2 577 600 IPR003591 -
Glsi14g1034 1052 Gene3D Transferase(Phosphotransferase) domain 1 847 1046 - -
Glsi14g1034 1052 Pfam Leucine rich repeat N-terminal domain 37 72 IPR013210 -
Glsi14g1034 1052 Gene3D Ribonuclease Inhibitor 37 154 IPR032675 -
Glsi14g1034 1052 ProSiteProfiles Protein kinase domain profile. 771 1052 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1034 1052 Pfam Protein kinase domain 773 1040 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1034 1052 Gene3D Ribonuclease Inhibitor 370 673 IPR032675 -
Glsi14g1034 1052 SUPERFAMILY Protein kinase-like (PK-like) 753 1042 IPR011009 -
Glsi14g1034 1052 ProSitePatterns Serine/Threonine protein kinases active-site signature. 893 905 IPR008271 GO:0004672|GO:0006468
Glsi14g1034 1052 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 82 245 - -
Glsi14g1034 1052 ProSitePatterns Protein kinases ATP-binding region signature. 777 799 IPR017441 GO:0005524
Glsi14g1034 1052 PRINTS Leucine-rich repeat signature 601 614 - -
Glsi14g1034 1052 PRINTS Leucine-rich repeat signature 580 593 - -
Glsi14g1034 1052 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 69 303 - -
Glsi14g1034 1052 CDD STKc_IRAK 777 1045 - -
Glsi14g1034 1052 Gene3D Phosphorylase Kinase; domain 1 735 846 - -
Glsi14g1034 1052 ProSiteProfiles Leucine-rich repeat profile. 603 625 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1034 Glsi-ChrGlsi14 11444473 11447631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1034 39 1040 Receptor kinase-like Gene Family AT1G55610 32.706 1.71e-153 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Glsi14g1034 Pkinase 5.3e-44 CL0016