Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1029 ATGGCTGATGCAGCAGGTTTAGCTGAGTTAGCAGGTTCAAGATTCAGTTCACTGGAGCTAATTGGACAGGGATCATTTGGAGACGTTTATAAAGGGTTTGACAGGGAGCTCAACAAAGAAGTTGCAATCAAAGTGATTGATCTGGAAGAATCAGAGGACGAGATTGAGGACATTCAGAAGGAAATTTCTGTTCTGTCACAATGTCGATCTCCATACATTACCGAGTATTATGGTTCCTATCTCAATCAAACTAAACTATGGATAATAATGGAATACATGGCTGGCGGCTCTGTTGCTGATCTACTCCAATCAGGTCCTCCACTCGATGAAATGTCAATCTCTTGCATTTTACGGGACTTGCTGCATGCAATTGATTACCTACATAGTGAAGGAAAAATCCATAGAGACATTAAAGCAGCAAACATTTTATTGACTGAGAATGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCACAGCTGACACGGACTATATCACGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCGGAGGTTATTCAAAATTCAGACGGATATAATGAGAAGGCAGATATCTGGTCTTTGGGGATTACTGCAATTGAGATGGCGAAAGGGGAGCCTCCACTTGCTGATCTTCACCCTATGAGAGTTCTTTTTATCATACCCAGAGAGAATCCGCCACAGCTAGATGAGCATTTTTCTCGTTCCATGAAGGAATTTGTTTCTCTGTGTTTAAAGAAGGTTCCTGCTGAGAGGCCAAGTGCTAAGGAACTTCTCAGACACCGTTTTATTCGGAATGCTAGGAAGAGTCCAAAGCTTTTGGAGAGAATAAGGGAGCGTCCAAAATACCAAATAAAGGAAGATCAGGCAACTTCTAGAAATGGCCCAAGAGGGATAGGAGAGGGGTCGGATACTATGAAGGTGGCGAGAGATATACGAGGGGAAGAAACTAATCAACTCAGTGGTCAGGGTAAAGGCCTGAAAAATTCTGGATGGGACTTCAGCATTGGTGGATCACAGGGTACTGGAACCTTTCGTAGTGTTTCACGTCCACCTCAATTTAGAGATAAGAAAACGGAAGCTTCAAATAATCCTGTTAGCCAAAGAAAAATTCCAGAGAGTGGCTATCAAGGAACATCAACCTATAGAAGTAGGCTTACTGAATCACCCGAAGCTACCTCTGGAAAAGATGTTAGGGTTCCTTACCATGATGAGGAGAAGGATAATCACCATGATGATGATGAATTGTCTGGGAATGGATCAGGAACTGTTGTTATTCGATCTCCAAAAGGGTCACAGCCATTGTTGTTTCATGACCCTAGCCCCAGGTCTAGCAGCAGCTTTGCTTCTTTTGAAGATACTTCTACCAGTGGAACTGTTGTTTTCCGTGGTCAGCATGATGATTCCGATGCACCTCAGACACCAAGATCTAGACTGGGACTTCAGGAGAGAAGTTCAAATGCTTCATTGGAGGATAGTTCTACAAATCTTGCTGAGGCAAAGGCTGCTATGCAAGGGGGACGGAAAGGAAATGGTCGAGAGAGATTTGCACTGGGAAAGATCAACAACGATTTGAAGGATAACAGGAGAGACCAAATGACAAGCAGCTCTGATTCTTCCAGATTATCTCGTGAACACATGGATGCGCAAAAGGGAATTTCAAGATTGCACCATGCTAGTGATGATGAAGAAACTGCCAAAATAATGTCATCCTCTGTACCGTTATCAAATTTGCTTATTCCTTCCATAAAAGAGGCCATAGCTGATGATCCAGAAGGGTCAGTTGTACAAGCAGTTATCAATTCACTTGTAAACATGGAGCGCACAAGGCCTAGATCCTGTGATGATCTTGTCAAAAAGTTGCTTCAGCGGTTGGCAAGTCCAAAGGAATCTTCATTGAAGGACCTCCAGGAGCTGGCAGTCCAGATATTTACCAAGTCAACTCCTGAAGAAACCCGAAATGCAAGCATAGCAGCGGATGGCCGGAAGAAACAACAGAACAAGGAGCTGCATTCAAATAGCAATTTGAGCCCACTAGCAAGATTTCTTCTCTCAAGATGGCAAGGTCAAGCCTCCCGGGATCTAAATCCAACTTAA 2106 0.434 MADAAGLAELAGSRFSSLELIGQGSFGDVYKGFDRELNKEVAIKVIDLEESEDEIEDIQKEISVLSQCRSPYITEYYGSYLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSISCILRDLLHAIDYLHSEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSDGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRSMKEFVSLCLKKVPAERPSAKELLRHRFIRNARKSPKLLERIRERPKYQIKEDQATSRNGPRGIGEGSDTMKVARDIRGEETNQLSGQGKGLKNSGWDFSIGGSQGTGTFRSVSRPPQFRDKKTEASNNPVSQRKIPESGYQGTSTYRSRLTESPEATSGKDVRVPYHDEEKDNHHDDDELSGNGSGTVVIRSPKGSQPLLFHDPSPRSSSSFASFEDTSTSGTVVFRGQHDDSDAPQTPRSRLGLQERSSNASLEDSSTNLAEAKAAMQGGRKGNGRERFALGKINNDLKDNRRDQMTSSSDSSRLSREHMDAQKGISRLHHASDDEETAKIMSSSVPLSNLLIPSIKEAIADDPEGSVVQAVINSLVNMERTRPRSCDDLVKKLLQRLASPKESSLKDLQELAVQIFTKSTPEETRNASIAADGRKKQQNKELHSNSNLSPLARFLLSRWQGQASRDLNPT 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1029 701 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Glsi14g1029 701 MobiDBLite consensus disorder prediction 523 537 - -
Glsi14g1029 701 MobiDBLite consensus disorder prediction 361 394 - -
Glsi14g1029 701 MobiDBLite consensus disorder prediction 478 497 - -
Glsi14g1029 701 MobiDBLite consensus disorder prediction 400 420 - -
Glsi14g1029 701 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1029 701 MobiDBLite consensus disorder prediction 544 565 - -
Glsi14g1029 701 MobiDBLite consensus disorder prediction 278 497 - -
Glsi14g1029 701 MobiDBLite consensus disorder prediction 523 565 - -
Glsi14g1029 701 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1029 701 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 12 648 - -
Glsi14g1029 701 SUPERFAMILY Protein kinase-like (PK-like) 12 298 IPR011009 -
Glsi14g1029 701 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1029 701 Coils Coil 41 68 - -
Glsi14g1029 701 MobiDBLite consensus disorder prediction 441 466 - -
Glsi14g1029 701 CDD STKc_MST3_like 13 287 - -
Glsi14g1029 701 MobiDBLite consensus disorder prediction 653 675 - -
Glsi14g1029 701 MobiDBLite consensus disorder prediction 319 352 - -
Glsi14g1029 701 Gene3D Transferase(Phosphotransferase) domain 1 12 300 - -
Glsi14g1029 701 FunFam serine/threonine-protein kinase dst1 isoform X1 12 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1029 Glsi-ChrGlsi14 11409675 11418846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1029 1 698 MAP Kinase Kinase Kinase Kinase AT3G15220 65.335 0.0 883
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Glsi14g1029 Pkinase 5.7e-69 CL0016