Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1013 ATGCGATTATCGTCCGCAGCCGGTTCGTCATTGGAGCAGAGGAAAATTGATCGATCGGGGTTGCGGCTTCGGAAGAAGCATAAGAAGTTAGACGCAATATGTGAAAAAGAGTATAAGCGGAACCATAGTGAATTAAATGAGGATGATGTTGGGGATGGTGCGTTGGGTGATGATACAGAACTTCGTCGCAGCTCACGGGTTCGGCGCGCTCCAGTTTTGCTCGATGCCTCCCCTCCTCCCCCAAGGAAGCGGCGGAGGTTAGATAAGAATGTAATGCTGAAGGGTGTGAAGGATGTCAAGAGTTCAGAACGTGTAAATCAGAGTCCCGGTGGTGTAGAGAGTCCAGGAACGTGGAGGTCAAGGTTGAGATCCAGAGTTAAAAATGTAGGTTTCAAAAAGGAGGAAAGGGGATCACCGAGTGGCAAAAGGAAGCTGTTTGAGGATATGGGTGAAAGCAGGGACGATGGAAAAGTGGAGGTTCTAGATATTAATAAGAAAGAGGAATTGGAAGGTGGGATGCCCAAAATAGTTAAGTCAAAAAGACCGGGGAGGATTAAAGCAACAAAACATGCAGAAGAGCATAAACATACTGAGTCCCATGGGGATTTAGACGAGAACTCGAATCAAGAAGTGGAGCTTATTTTGAACAAAGATGAGGAGAGTCCTTCAGTTTTGGAAAGTAAATTGTCTGGTGGGAATGTGATAGAAATAGTGGATGGAAGTGACCCTCTAGTGACTGGGACCAGCGAAAGAAACATATCTGATAATTTACAGTCAGAGGAGTTTAATGGCAACATCGAACTGTCTCCAGTGGAACATGTAAATAAACCGGTTGATCAATTAGAGAGTGTGAAGGAAGGTGAAAATGGAAAGGTTGCTGTAGACATTGTTGAAAATCTGACAAAACATATAGAAAATGAAGGATCTGTTGATAAGGAATTTGCAATTGATGAAAAGACACTGCAAGATGAAAATATTGTAAACATTGACAAGCCCAAACAAGTGTCAAATGACATGACTGGCCAACCACGTATTAAGGAGGGCAGACGGTGTGGTTTGTGTGGTGGAGGAACAGATGGTAAGCCTCCAAAGAAGTTAGTTCAAGATAATGGTGAGAGTGAAAATGAGGCATACAGTGGGTCTTCAGCTTCCGAGGAGCCTAACTATGATATTTGGGACGGTTTTGGCGATGAACCTGGCTGGCTTGGGCGTCTCTTAGGTCCTATTAATGATCGCTTTGGTATTGCTGGAATATGGGTTCATCAGCACTGTGCTGTATGGAGTCCCGAGGTTTATTTTGCTGGCTTGGGATGCTTAAAAAATGTGAGGGCTGCACTTTGCAGAGGAAGAGCATTGAAGTGCACACGTTGTGGGAGGCGTGGGGCTACCATTGGTTGTCGTGTTGATCGGTGTCCAAAGACGTATCACTTGCCTTGTGCCCGAGCAAATGGTTGCATCTTTGATCATCGCAAATTTCTTATAGCCTGTACTGATCATCGGCATTTCTTCCAACCTTATGGTAATCAATATTTTTCCCGGATAAAGAAGTTGAAGGCTAGAAAACTGAAGTTGGAGATGAGAAAGCTTTCAAATGATTCAATGAGAAAGGATATTGAAGCAGAAGAGAGATGGTTGGAAAATTGTGGTGAGGATGAAGAATTTTTGAAACGTGAGAACAAGAGGCTTCATCGTGATTTATTGAGAATAGCCCCCGTGTACATTGGTGGTCCAGACTCTGACAGTGGAAAAACGTTTCAGGGCTGGGAATCTGTTGCCGGGCTTAAAGATGTCATCCGATGCATGAAAGAAGTTGTTATTTTACCTCTGCTCTATCCTGAGTTCTTTGATAATTTAGGGCTCACACCTCCAAGAGGTGTTCTTTTGCATGGATATCCTGGAACAGGTAAAACTTTAGTGGTTCGGGCCTTGATAGGTGCATGTGCTCGTGGTGATAAAAGGATTGCGTATTTTGCCCGTAAAGGTGCAGATTGCTTGGGGAAATATGTAGGTGATGCTGAGCGCCAGCTAAGACTACTATTTCAGGTTGCTGAAAAATGTCAACCTTCTATAATATTTTTTGATGAGATAGATGGATTGGCACCTAGCCGTACTAGGCAGCAAGATCAGACACATAGTTCTGTTGTGTCAACATTGCTTGCTCTTTTGGATGGTTTGAAATCTAGGGGTTCAGTTGTAGTCATAGGTGCAACAAATCGCCCTGATGCTGTTGACCCAGCACTTAGGCGCCCTGGAAGATTTGACCGCGAAATTTATTTTCCATTGCCATCAATTGAGGACAGAGCTTCCATTCTCTCACTTCACACACAGAGGTGGCCAAAACCAATTACTGGATCCTTACTAGAGTGGATTGCAAGAAAAACTCCTGGCTTTGCTGGTGCTGATCTCCAGGCTCTCTGTACTCAAGCTGCCATTAATGCTTTGAAGAGAAATTTTCCTTTACAAGAAGTTCTGTCTGCAGCTGCAGAGAAAGGTTCTGGTTGTAAGCGCCTTCCTCTTCCATCCTTTGCTGTGGAGGAGAGGGATTGGTTGGAGGCTTTATCATGTTCACCACCACCGTGTTCCCAGAGAGAAGCTGGAAATGCTGCTAATGATGTTGTATGCGCCCCTCTTCCCAGCCACCTTATTCCTTGTTTGTTGCGACCATTATGCACTCTGCTTGTATCTCTCTATCTTGATGAACGCCTATGGTTGCCACCTCCTATGCTTAAAGCTGTAACAATGATTAAGAATGTGATTATTTCTGCTCTGGACAAAAAGAAAATGTCTGTTGATCACTGGTGGTTGCATGTTGATGGTTTTCTTCAAGAAACAGATATTGCTGCCAATGTAGAGAGGAAGCTCACTTGTTCTAGCATTTTATCTGTGGATGATGGCTTTGCTGGTTTTCATGACCCTGTGGATGATACTGATGATAAAAGGGTGCTAGTTGAACCTTCTATAAAGCAACATGTTGGCATGTGCAGTGGTTTGTTGCCAGATATGTCATTTGCAGTGACTAACAAGTCAGGATATCGGATATTGATAGCTGGAAATCCTAGATCTGGTCAGAGACATCTTGCTTCCTGCCTTCTTTACTGCTTTATTGGTAATGTTGAAATTCAGAAGATTGATATGGCAACTATTTCACAAGAAGGACATGGAGATGTAGTGCAAGGGATTGCACAAATACTAATGAAATGTGCTAGCGTGAAATCATGTTTAGTATTCATGCCAAGAATTGATCTGTGGGCTGTGGAGACACATTTTCAAGTTGCTGAAAATTCTGATTACTGCTCCGCAAATCATCAAATTCCTGAGATAGAAGAGTCTTGTTTCACACAGAGTCAAGTTATTGAAAAGGAAAACGAGTTCAACCCAAAGAAAGACAAATCAGAAGAGATGGCCGAGGGCCAAGCCAGCACAAGGGCTTCACATGCCTGGATGTCATTTATTGAGCAGGTGGAATCCATAGGTGTAGCCACATCCTTGATGATTCTGGCTACTTCAGAAGTTCCATATCCAGAACTTCCATGTAAAGTAAGGAAGTTCTTTAGGAGTTACCAGTCAAGTGATGGCCAGTCTGCTTCTTTGGTGCAGACAGTTCCTCGATTTTCTCTTCAGATTGATGGGAACTTTGATCATGAGGCAGTGATCAATCTGTCTGCAGTAGAGCTATTTAGAAATGTAATTGAGCAGCTGGTTCAATTGATCCATCAAAGATCTCATGTCGATATTGGTTTCAAAAAGGGGTACGGAACCTACAATGCAATTGAAAGTTGTAAAGATAGGGCATGTCAGGGGAAAGATAATGGATCCACCAACGAAAATAAGGATAGAATCCAACCTCCTGAAACCCTTAGTAAAGTTCCACCACCACCTAACAGTAGGTTGCTGAAAGGAAAGTCAACCCTGTTGTTGGCAATATCAACCTTTGGTTATCAAATTCTACGGTTCCCTCATTTTGCTGAACTTTGTTGGGTCACATCAAAACTCAAGGAAGGTCCTTCTGCCGATGTAAGTGGACCTTGGAAGGGGTGGCCTTTCAATTCCTGTATAATTCGTCCTAATAATCCACAAGACAAGGTAGCTATTTCTTGTAGCTCTGGCCATATTAAAAGCAAAGAAAAATCTGGTTTAGTCAGAGGCTTGATGGCTGTTGGTTTATCAGCATACAGAGGTACTTATACATCTGTTAGGGAAGTTTCTAGTGAGGTACGGAAGGTTCTTGAGATCTTAGTTAGGGAAATCAACACAAAAGTTCAAGCCGGGAAAGATAGATATCAATATCTGCGTGTTCTATCTCAAGTAGCTTATTTGGAAGATATGGTCAATAACTGGGCATATGCATTGTTGAGTCTAGAGCAGGATTCCCCAGAGCTTGTGGCAAAGGTTACATCAACTAGTGTTGGGTCATTAAACAGTAATCTCACATGTAAAGAGCTCCACCAGTTGGTTGTCCCCATGGAAGGTCATGAACCAGAGATGCTGGAGAGAATTCCCAAGGGAATTGCTGCTGAGACACCTGGATGTCATGCCCTGAATAATAGAAATGATAATGTAGATAATCTTGATCATGATGATAGAGTTACAATTTCAGAAAGATCTCGACAAAAACATTCTCTTTTAGATGAGCATATTAACAATTCTGCTGCTGCAAACCAGCCTGTTGACCGAGTTGCAAATGAGGAGAACGGCACACTCTATGGACTATCTGAATCAGGAACAGCTGGAAATCATGAAATGATAAATGAAAAATTTGGATCCTCAAAAGACTCCAATGGATCTGCACTTACTCACTCTGTAGCCCTTTCTGAAAATGAAGAATTTAGGTTGTCAAAAGATTTAAATGGATCCGCATTTACTCATTCTGCTGCCCTTTCTGATAATGAACTTCACAGTGCCTGTGAACCAGAGGGCATTGAAATTGGTAACTGCAGGACAGAATCTATTATGGTTCCTGGCTTGTCCGCAGCAGAGACTGGTATTAAATTATGTGATGTTGACTCTGGTATAGATGTGAATTCTGTAGAAATTAATGTATCAAGTAAAGACAGTGATTCTACTGAATCTGGGGTTGTCTGTTTGTATCAATGTTGCCCTGGATGTCTTTACAGTCTCTATCATTTGACACAGAAAATCCTTGCTCGTGAGTGGGGATTGAATAGAAGCCATTGGACCATAGAAGATGTCCATGATGTTGTTGCATCATTATCTGTTGATCTTATTTCAGCAGTTAGAAAAATTTATTCTGCTGAAGATGTCAATGACTTATCCAATAAAACTTCAAGACATGAAAAACATGGAACATTTCTTGACTGTTCGAACTCAAGAATGTGCAATCCTAGAAATCTAGACAGGTTTGTTGTGCCAGCTGAATGTATGTCTCACTCCACAAGCCAACATGCAACTGGAAGCAAGGATACTGCATCGAATGAACTGCTGAAGCTTGATTTAAAATTTGTTTTCAGAGATGGTGTACTGGTTAATATGGACCCTGACAAGGATGTCTCTCTTCACTGTAAATTTGAGACCTTGTGCCTTTGTTCTGTTAAAGAGTTGATAGTAATGACGAAGCACCCTTTTGATTGA 5589 0.4219 MRLSSAAGSSLEQRKIDRSGLRLRKKHKKLDAICEKEYKRNHSELNEDDVGDGALGDDTELRRSSRVRRAPVLLDASPPPPRKRRRLDKNVMLKGVKDVKSSERVNQSPGGVESPGTWRSRLRSRVKNVGFKKEERGSPSGKRKLFEDMGESRDDGKVEVLDINKKEELEGGMPKIVKSKRPGRIKATKHAEEHKHTESHGDLDENSNQEVELILNKDEESPSVLESKLSGGNVIEIVDGSDPLVTGTSERNISDNLQSEEFNGNIELSPVEHVNKPVDQLESVKEGENGKVAVDIVENLTKHIENEGSVDKEFAIDEKTLQDENIVNIDKPKQVSNDMTGQPRIKEGRRCGLCGGGTDGKPPKKLVQDNGESENEAYSGSSASEEPNYDIWDGFGDEPGWLGRLLGPINDRFGIAGIWVHQHCAVWSPEVYFAGLGCLKNVRAALCRGRALKCTRCGRRGATIGCRVDRCPKTYHLPCARANGCIFDHRKFLIACTDHRHFFQPYGNQYFSRIKKLKARKLKLEMRKLSNDSMRKDIEAEERWLENCGEDEEFLKRENKRLHRDLLRIAPVYIGGPDSDSGKTFQGWESVAGLKDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGYPGTGKTLVVRALIGACARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPSRTRQQDQTHSSVVSTLLALLDGLKSRGSVVVIGATNRPDAVDPALRRPGRFDREIYFPLPSIEDRASILSLHTQRWPKPITGSLLEWIARKTPGFAGADLQALCTQAAINALKRNFPLQEVLSAAAEKGSGCKRLPLPSFAVEERDWLEALSCSPPPCSQREAGNAANDVVCAPLPSHLIPCLLRPLCTLLVSLYLDERLWLPPPMLKAVTMIKNVIISALDKKKMSVDHWWLHVDGFLQETDIAANVERKLTCSSILSVDDGFAGFHDPVDDTDDKRVLVEPSIKQHVGMCSGLLPDMSFAVTNKSGYRILIAGNPRSGQRHLASCLLYCFIGNVEIQKIDMATISQEGHGDVVQGIAQILMKCASVKSCLVFMPRIDLWAVETHFQVAENSDYCSANHQIPEIEESCFTQSQVIEKENEFNPKKDKSEEMAEGQASTRASHAWMSFIEQVESIGVATSLMILATSEVPYPELPCKVRKFFRSYQSSDGQSASLVQTVPRFSLQIDGNFDHEAVINLSAVELFRNVIEQLVQLIHQRSHVDIGFKKGYGTYNAIESCKDRACQGKDNGSTNENKDRIQPPETLSKVPPPPNSRLLKGKSTLLLAISTFGYQILRFPHFAELCWVTSKLKEGPSADVSGPWKGWPFNSCIIRPNNPQDKVAISCSSGHIKSKEKSGLVRGLMAVGLSAYRGTYTSVREVSSEVRKVLEILVREINTKVQAGKDRYQYLRVLSQVAYLEDMVNNWAYALLSLEQDSPELVAKVTSTSVGSLNSNLTCKELHQLVVPMEGHEPEMLERIPKGIAAETPGCHALNNRNDNVDNLDHDDRVTISERSRQKHSLLDEHINNSAAANQPVDRVANEENGTLYGLSESGTAGNHEMINEKFGSSKDSNGSALTHSVALSENEEFRLSKDLNGSAFTHSAALSDNELHSACEPEGIEIGNCRTESIMVPGLSAAETGIKLCDVDSGIDVNSVEINVSSKDSDSTESGVVCLYQCCPGCLYSLYHLTQKILAREWGLNRSHWTIEDVHDVVASLSVDLISAVRKIYSAEDVNDLSNKTSRHEKHGTFLDCSNSRMCNPRNLDRFVVPAECMSHSTSQHATGSKDTASNELLKLDLKFVFRDGVLVNMDPDKDVSLHCKFETLCLCSVKELIVMTKHPFD 1862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1013 1862 MobiDBLite consensus disorder prediction 127 154 - -
Glsi14g1013 1862 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 588 853 IPR027417 -
Glsi14g1013 1862 MobiDBLite consensus disorder prediction 36 69 - -
Glsi14g1013 1862 Pfam AAA+ lid domain 787 819 IPR041569 -
Glsi14g1013 1862 MobiDBLite consensus disorder prediction 1265 1295 - -
Glsi14g1013 1862 Pfam PHD-like zinc-binding domain 421 500 - -
Glsi14g1013 1862 MobiDBLite consensus disorder prediction 79 101 - -
Glsi14g1013 1862 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 762 854 - -
Glsi14g1013 1862 MobiDBLite consensus disorder prediction 171 209 - -
Glsi14g1013 1862 MobiDBLite consensus disorder prediction 1266 1280 - -
Glsi14g1013 1862 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 396 502 IPR013083 -
Glsi14g1013 1862 MobiDBLite consensus disorder prediction 354 385 - -
Glsi14g1013 1862 SMART AAA_5 622 763 IPR003593 GO:0016887
Glsi14g1013 1862 ProSiteProfiles Extended PHD (ePHD) domain profile. 390 500 IPR034732 -
Glsi14g1013 1862 PANTHER AAA DOMAIN-CONTAINING 25 1761 IPR045199 -
Glsi14g1013 1862 Gene3D - 588 863 IPR027417 -
Glsi14g1013 1862 ProSitePatterns AAA-protein family signature. 731 749 IPR003960 GO:0005524|GO:0016887
Glsi14g1013 1862 MobiDBLite consensus disorder prediction 1 21 - -
Glsi14g1013 1862 FunFam P-loop containing nucleoside triphosphate hydrolases superfamily protein 346 502 - -
Glsi14g1013 1862 MobiDBLite consensus disorder prediction 1570 1598 - -
Glsi14g1013 1862 Pfam ATPase family associated with various cellular activities (AAA) 626 761 IPR003959 GO:0005524|GO:0016887
Glsi14g1013 1862 MobiDBLite consensus disorder prediction 36 154 - -
Glsi14g1013 1862 Gene3D - 762 854 - -
Glsi14g1013 1862 FunFam ATPase family, AAA domain-containing 2 585 768 - -
Glsi14g1013 1862 MobiDBLite consensus disorder prediction 186 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1013 Glsi-ChrGlsi14 11334284 11342633 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1013 588 823 Calmodulin-binding Proteins AT3G56690 41.176 4.58e-45 176