Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1006 ATGGACCTTAAGCAGTGTAAGGAATCCTGTCTGGAAAACTGCTCCTGTACAGCATACGGAAATTTGGATATCCGGGCTGGAGGAAGTGGCTGCTTACTTTGGTTTGATGGTTTGATTGACATAAGGCAACTCCCTCAAGGGGGACAAGACCTTTATATACGAGTTCCTGCTACAGAGCTAGATCATGCTGCAGACTATGGCCATGGTAAAATCAGCAAGAAGAAGTTAATAGCAGGAATAGCAGTTGGCTCATCATTATTAGTCATGAGTTTAATAATTATTGGGTTGACAACATATACATGGAAAAAGAAACTTCAAAAGCCAGGGATGGCAACAATATTTTGCTGGAAGCATCACAAAAATGAAACTGGAAGAAAGCTCTTGGATTGGCTCAAGCGATTCCACATTATTGGTGGCATTGCTCGAGGGCTTCTCTATCTTCATCAAGACTCTAGATTGAGAATCATTCACAGAGATCTCAAAACTAGCAATATTCTGCTTGATGCCCATATGAATCCAAAAATTTCAGACTTTGGCTTGGCTAGAACTTTTGGAGGAGACCAAGTTGAAGCCAACACAAATAGAGTGGTTGGAACATAG 600 0.4117 MDLKQCKESCLENCSCTAYGNLDIRAGGSGCLLWFDGLIDIRQLPQGGQDLYIRVPATELDHAADYGHGKISKKKLIAGIAVGSSLLVMSLIIIGLTTYTWKKKLQKPGMATIFCWKHHKNETGRKLLDWLKRFHIIGGIARGLLYLHQDSRLRIIHRDLKTSNILLDAHMNPKISDFGLARTFGGDQVEANTNRVVGT 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1006 199 Pfam PAN-like domain 1 41 IPR003609 -
Glsi14g1006 199 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Glsi14g1006 199 Gene3D Transferase(Phosphotransferase) domain 1 114 199 - -
Glsi14g1006 199 FunFam Os07g0541700 protein 102 199 - -
Glsi14g1006 199 Pfam Protein kinase domain 135 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1006 199 ProSiteProfiles PAN/Apple domain profile. 1 56 IPR003609 -
Glsi14g1006 199 SUPERFAMILY Protein kinase-like (PK-like) 121 199 IPR011009 -
Glsi14g1006 199 ProSiteProfiles Protein kinase domain profile. 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1006 199 CDD PAN_AP_plant 1 56 - -
Glsi14g1006 199 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 113 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1006 Glsi-ChrGlsi14 11296872 11298485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1006 120 199 Receptor kinase-like Gene Family AT4G23280 71.250 2.33e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi14g1006 Pkinase 2.1e-14 CL0016