Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0995 ATGGCACAGTTACCTCCTAAAATACCTACCATCACCCAAAATTGGCCATCTTTTCCTTACCAATCAACTATGGCAAATTTCATTCCCGCCGGCACTACTACCACTACTCAACAAAATCATCATCATCATAATCAACAACAACAATTACCTTCCTGGGTGGACGAGTTCCTCGACTTCTCGTCGGAGCGACGAGGTGATCATCGGCGGTCGGCGAGCGACTCGGTTGCATTTCTTGAAGAATGCCGGAATTCAGCTTCTATGATCCCGGGGACCCATGGGTTCGACAGGTTGGATGAGGACCAGCTCATATCCATGTTCTCCGACGACATCGCCTCCGGTTCTCTTCCGCTGTCATTCTCGAACCCGTCCACGCCGTCCGATCAAAATAGCAACAATGATGAGAAGCCAATGGCCTTGGACATCGTTGCAGTTCAAGACCATCAGCAGCAGCCGCCCCCCAAGAATGAACCGGGGGAGGAGGAAAGCTCATGCAAAAATGACACCCCATCGCCGCCACCCTCTGCCACCCCCAACGCCAGCGGCGGCGAAACTGTTTTCGATCCCAAAAGGGTCAAAAGAATTTTGGCAAACAGGCAATCAGCTCAGAGGTCAAGGGTGAGGAAGCTACAATACATCTCTGAGCTTGAAAAGAGCGTAACAGCATTGCAGACGGAGGTATCAGCGTTGTCGCCAAGAGTTGCATTCTTGGACCACCAACGTTTGATTCTGAACGTGGACAACAGTGCCTTGAAGCAACGTATTGCTGCTTTGGCCCAAGACAAGATTTTCAAAGACGCTCATCAAGAAGCATTAAAGAAGGAAATAGAAAGACTAAGGCAAATATATCACCAACAGAACCAACAGAAGAGGGACAACTCAGTGAACAACAATAGTGGCCAAAATTCTCTTCATTCACCATTAACATCACAAGCACCACTGCCACCACAACATCACCATTAG 960 0.4885 MAQLPPKIPTITQNWPSFPYQSTMANFIPAGTTTTTQQNHHHHNQQQQLPSWVDEFLDFSSERRGDHRRSASDSVAFLEECRNSASMIPGTHGFDRLDEDQLISMFSDDIASGSLPLSFSNPSTPSDQNSNNDEKPMALDIVAVQDHQQQPPPKNEPGEEESSCKNDTPSPPPSATPNASGGETVFDPKRVKRILANRQSAQRSRVRKLQYISELEKSVTALQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQIYHQQNQQKRDNSVNNNSGQNSLHSPLTSQAPLPPQHHH 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0995 319 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 192 207 IPR004827 GO:0003700|GO:0006355
Glsi14g0995 319 PANTHER BASIC LEUCINE ZIPPER 34 1 308 - -
Glsi14g0995 319 SMART brlzneu 185 249 IPR004827 GO:0003700|GO:0006355
Glsi14g0995 319 FunFam Basic leucine zipper 61 188 261 - -
Glsi14g0995 319 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 187 239 IPR004827 GO:0003700|GO:0006355
Glsi14g0995 319 CDD bZIP_plant_RF2 190 240 IPR044759 GO:0003700|GO:0006355
Glsi14g0995 319 SUPERFAMILY Leucine zipper domain 189 243 IPR046347 GO:0003700|GO:0006355
Glsi14g0995 319 Coils Coil 268 288 - -
Glsi14g0995 319 Pfam bZIP transcription factor 189 234 IPR004827 GO:0003700|GO:0006355
Glsi14g0995 319 MobiDBLite consensus disorder prediction 285 319 - -
Glsi14g0995 319 MobiDBLite consensus disorder prediction 285 312 - -
Glsi14g0995 319 Gene3D - 188 262 - -
Glsi14g0995 319 MobiDBLite consensus disorder prediction 146 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0995 Glsi-ChrGlsi14 11236770 11238592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0995 1 267 bZIP Transcription Factor Family AT3G58120 54.422 6.47e-85 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi14g0995 bZIP_1 1.5e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g0995 14 11236770 11238592 Glsi14g0995 14 11236770 11238592 ECH