Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0994 ATGCGAAGATTTGGTTCTTTGTTTTACTTGAATACCATAGTTTTAACTTTCTTAGGAAGGGCCATAAAGGATCCTGACCCATCTACTAGTGCCATGGGCATAATAGGAGCTATTATAGATAATAGCTCTCGCATTGGTAAAGAGGAGACAGTGGCCATGAAGATGGCAATGGAGGATTTCTATCATTCCACCAATCAAAGTTTTCTTCTACACATAATGAACTCTCGGGGTGATCCCCTTCGGGCAGCCATTTCAGCCATAGACCTTATCGACGAGCAAAACGTGCAAGCCATTATAGGACCACAAACATGGGAAGAGACAGCCTTAGTTGCTGAGATTTGTAGCCAAAGGAGCACTCCAATTCTGTCTCTTGCTGATGCAACTCCATTGGGGGCAACAGAGAAGTGGCACTACCACGTACAAGCCTCACCCAGTCTCTTCACCCAAATGAAAGCCGTAGCTGCTATTGTTCAGTCTTGGAAATGGCATCAAGTTAGCATAATCTACGAAGACACAGATTCTTACTCCACAGGAGTTTTACCTCATCTCTCTAAATCCCTCACCGAAGCAGATGTAGGAATCAGCAACCTTGTACCACTCCCGCCTTTTTTTTCCTCTTCCGTGTTGTCTCGAGAACTCGACAAGCTTCGACAAGGTTCACGTAGAGTCTTTATCGTCCATTTGTCCTCTCATTTGGCCCTGCACCTGTTCAAAACTGCAAAGAAGATGAAAATGATGGAGAAAGATTATGTTTGGATCACCACTGATCCCTTTTCAAGCCTTGTCCATTCCCTGAACTCATCCACTATCTCCACGATGCAAGGGACCATTGGGGTAAAGAGCTTTTTCTCAGACATGGGCCACCGATACGAGGATTTCTACCTCAGCGGAAAAGTTCAGTTCACAGACCAGAAATTAGCTCCTGCACATACTTTCCAGATCGTCAATGTGATGGGAAAGAGCTATAGGGAACTTGGGTTCTGGTCTGATGGGCTGAATTTCTGGGAAAATAATGGCCAGGGTGCTACTTACAATTCTTCAATGAAGACCCTGGGACAAGTGTTTTGGCCAGGAGGACCTTCTTATGCTCCAAGAGGGTGGATCCAATCATCAGACGCCCAGCCACTGAGAATTGGGGTCCCGGGATTTACTATAGATGTTTTCAAAGCTACTGTAGAATCGTTGCCTTACTATCTGCCTTACGAATTCTATGCTTTCAATGGCACATATGATGAGCTGGTGGAACAAATTTATCTGAAGTTGCACAAAGAATTCTCGCTTAAGGATCTTGTCTTTCAAGTTGTTGGTGATGTGACAATACTGTCAAAGCGGTATGAGCATGCTGAATTCAGTAAACCCTACACTGAATCAGGTGTTGTGATGATAGCCCCTCTTCGACCAAAAGCAGGCACCAAAGCTTGGTTATTCATGAAGCCTTTTACAAAGACCATGTGGGTTCTAATAGGGGCCATGATTGCCTACAATGGGTTTGTTCTATGGATGTTAGAAAGAAACCACAGCCCTGAACTCAAGGGCTCTCCTCTCCATCAAACTTGCACCATGGTGTGTTCGGCTTTGTCCACCCTTATTTCCTTACACGGGGAGAAGTTACACGGCAATTTATCAAGGATGACAATGGTGGTTTGGCTGTTTGTGGCACTAATCATAACACAGACATACACGGCTAACCTAGCCAGCATGCTAACTGTTGAACGGCTTGAGCCCACTGTGGACAATGTTAATCAGCTAAGGAAAAGCAATGCCATGGTCGGATATAGTAGGCCATCCTTCATGAAACGGTATTTGCAGGAAGTGTTACATTTCCATCCTCAAAACCTCAGAAACATTCTCTCCCAGGATGAGTATGCTCAAGCTCTCAAAAGGAATGAAATTTCAGCTTTCTTCCTTGAACTTGCAGAGGAAAAAGTTTTCATGGCTAAGTATTGTAAAGGCTTTGCTCGAGTTGGGCCCACTTACAAAGTTGGAGGCTTTGGATTTGCATTTCCAAAGGGATCTCCATTGCTTTATAGTGTAGACAAAGCTCTGCTAGGTTTATCTGAAAATGGGCATCTACGAGATCTGGAAAACAGGATGCTTGCATCACAGGAATGTGTAGAAGAGGATCCAACTAAAGAAACCACAAGTCTCAGCCCAAACAGCTTCTGGGCACTTTTTATATTCACAGGAGGCACATCAACAATTGGTCTCTTGGTTTACATTTTCCGTATGACCGACTCAATCCGGAGACATAAAACAATCTGGAGAATGATTGTGGCTATTGTGAAGAACTGGGAATCCCAGAAGATAATATTCTCAAGAAGAGTCCAAAATAATGGTTCAGAAAGTCCTGCAAATTCTCTAAACAGGTCTGATTTACCAACTCAAGCTTAA 2391 0.4383 MRRFGSLFYLNTIVLTFLGRAIKDPDPSTSAMGIIGAIIDNSSRIGKEETVAMKMAMEDFYHSTNQSFLLHIMNSRGDPLRAAISAIDLIDEQNVQAIIGPQTWEETALVAEICSQRSTPILSLADATPLGATEKWHYHVQASPSLFTQMKAVAAIVQSWKWHQVSIIYEDTDSYSTGVLPHLSKSLTEADVGISNLVPLPPFFSSSVLSRELDKLRQGSRRVFIVHLSSHLALHLFKTAKKMKMMEKDYVWITTDPFSSLVHSLNSSTISTMQGTIGVKSFFSDMGHRYEDFYLSGKVQFTDQKLAPAHTFQIVNVMGKSYRELGFWSDGLNFWENNGQGATYNSSMKTLGQVFWPGGPSYAPRGWIQSSDAQPLRIGVPGFTIDVFKATVESLPYYLPYEFYAFNGTYDELVEQIYLKLHKEFSLKDLVFQVVGDVTILSKRYEHAEFSKPYTESGVVMIAPLRPKAGTKAWLFMKPFTKTMWVLIGAMIAYNGFVLWMLERNHSPELKGSPLHQTCTMVCSALSTLISLHGEKLHGNLSRMTMVVWLFVALIITQTYTANLASMLTVERLEPTVDNVNQLRKSNAMVGYSRPSFMKRYLQEVLHFHPQNLRNILSQDEYAQALKRNEISAFFLELAEEKVFMAKYCKGFARVGPTYKVGGFGFAFPKGSPLLYSVDKALLGLSENGHLRDLENRMLASQECVEEDPTKETTSLSPNSFWALFIFTGGTSTIGLLVYIFRMTDSIRRHKTIWRMIVAIVKNWESQKIIFSRRVQNNGSESPANSLNRSDLPTQA 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0994 796 SUPERFAMILY Periplasmic binding protein-like I 35 367 IPR028082 -
Glsi14g0994 796 CDD PBP1_GABAb_receptor_plant 35 338 IPR044440 -
Glsi14g0994 796 MobiDBLite consensus disorder prediction 777 796 - -
Glsi14g0994 796 SUPERFAMILY Periplasmic binding protein-like II 350 697 - -
Glsi14g0994 796 Pfam Bacterial extracellular solute-binding proteins, family 3 434 697 IPR001638 -
Glsi14g0994 796 FunFam Glutamate receptor 473 611 - -
Glsi14g0994 796 SMART GluR_14 377 701 IPR001320 GO:0015276|GO:0016020
Glsi14g0994 796 FunFam Glutamate receptor 149 310 - -
Glsi14g0994 796 Gene3D - 473 604 - -
Glsi14g0994 796 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 35 743 IPR015683 -
Glsi14g0994 796 Gene3D - 374 472 - -
Glsi14g0994 796 Pfam Ligand-gated ion channel 698 730 IPR001320 GO:0015276|GO:0016020
Glsi14g0994 796 Pfam Receptor family ligand binding region 51 326 IPR001828 -
Glsi14g0994 796 CDD GluR_Plant 374 699 - -
Glsi14g0994 796 PIRSF IGluLR_plant 380 791 IPR017103 -
Glsi14g0994 796 PIRSF IGluLR_plant 286 382 IPR017103 -
Glsi14g0994 796 PIRSF IGluLR_plant 3 293 IPR017103 -
Glsi14g0994 796 Gene3D - 147 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0994 Glsi-ChrGlsi14 11227777 11236209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0994 295 743 Ion Channels AT3G51480 34.728 1.94e-84 286