Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0982 ATGATACACAGTGGAGTGTGCAGTCTCCGTACGTACTGCCTGCATCTCCCTTGCTTCTTGGAGAAACCTCTATTCCGAGCAGCTCGGGTCTCATTCACTTGCCGCCGCCGCCGCCGCCTTTTGGCCACCGCGTCCTCAGTTCCCGAAGCGAAGAAGAAGGACACCAAAGAGAAGGTCATAGTGATTTCTGGTCCCACTGGGTCTGGTAAAAGCCGGCTTGCATTGGAGCTCGCGAAGCGCCTCAATGGTGAAATTATTAGTGCGGACTCTGTCCAGGTATACCAGGGTCTTGATGTTGGATCAGCGAAGCCCTCCCTAAATGATAGAAAGGAGGTACCTCATCATCTGATTGACATATTGCACCCATCTGAAGACTATTCTGTTGGAAATTTTTTTGAGGATGCAAGGAAAGCTGCGCGATGCATTCTTGACAATGGTCGTGTTCCTATAGTTGTCGGGGGAACTGGATTGTATTTAAGATGGTTCATTTATGGAAAGCCTGATGTCCCCAAAGCCTCTCCAGAGACTATATCTGAAGTGTATTCAGATTTAGCTGAATTACAGAGAAATGAGGACTGGGATACAGCTGTGCAGTTGGTTGTGAAGGCGGGTGACCCAAAGGCCCAATTTCTAACTTCCAATGATTGGTACCGATTGCGGCGTAGTCTTGAGATTATCAAATCTAGCGGATCACCTCCATCTGCTTTTCGGGTACCATACGATTCATTCAGGGAACTGGGTGATTCTAGTGTAGTGGACAATTCTGAATCTTCTGATGTCAATACTATTGGTGATGGAATGAAAGAAACATTCTCAGATTTGGACTACGAGTTCATTTGTTTTTTCCTTTCTAGCCGAAGACTTGACCTCTATAGATCAATTGACTATCGCTGTGAAGATATGCTATTAGAAAAGGATGGGATTTTGTCTGAGGCTCAATGGCTTCTTGATATGGGTCTTCATCCAAATTCAAATTCTGCAACGCGAGCTATTGGCTACAGGCAGGCCATGGAGTACTTACTAAGATGCAGACAGCAAGGGGGTCAGAGTTCAGCTCGAGAATTCTTCAGTTTTTTATCTGAATTTCAAAAAGCATCTAGGAATTTTGCCAAAAGACAATTGACATGGTTTCGTAATGAATGTATATACCACTGGCTTGATGCTTCTAAACCTCTGGAAGCTGTTCTAGACTTTATCCACAATTCTTACCATGACAAGAGTAAAACTCTCGTCGTGCCTGAACACCTAAGAATGTCTAGAGATATTTCTAACCGCCGAGAAGCTTCTGACCTCAAGTCCTACCTCACCAAAAATAGGCATTTGGTGAATAGAGAAGATTGTTTTCATATTCTGGACTGGATAAGGAACGCAAAAGTGAATGAATGA 1386 0.4423 MIHSGVCSLRTYCLHLPCFLEKPLFRAARVSFTCRRRRRLLATASSVPEAKKKDTKEKVIVISGPTGSGKSRLALELAKRLNGEIISADSVQVYQGLDVGSAKPSLNDRKEVPHHLIDILHPSEDYSVGNFFEDARKAARCILDNGRVPIVVGGTGLYLRWFIYGKPDVPKASPETISEVYSDLAELQRNEDWDTAVQLVVKAGDPKAQFLTSNDWYRLRRSLEIIKSSGSPPSAFRVPYDSFRELGDSSVVDNSESSDVNTIGDGMKETFSDLDYEFICFFLSSRRLDLYRSIDYRCEDMLLEKDGILSEAQWLLDMGLHPNSNSATRAIGYRQAMEYLLRCRQQGGQSSAREFFSFLSEFQKASRNFAKRQLTWFRNECIYHWLDASKPLEAVLDFIHNSYHDKSKTLVVPEHLRMSRDISNRREASDLKSYLTKNRHLVNREDCFHILDWIRNAKVNE 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0982 461 Pfam IPP transferase 92 380 - -
Glsi14g0982 461 Gene3D - 168 238 - -
Glsi14g0982 461 Hamap tRNA dimethylallyltransferase [miaA]. 59 397 IPR018022 GO:0008033
Glsi14g0982 461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 190 IPR027417 -
Glsi14g0982 461 FunFam tRNA dimethylallyltransferase 9 167 238 - -
Glsi14g0982 461 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 59 236 IPR018022 GO:0008033
Glsi14g0982 461 Gene3D - 56 450 IPR027417 -
Glsi14g0982 461 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 56 393 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0982 Glsi-ChrGlsi14 11134600 11141817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0982 62 359 C2H2 Transcription Factor Family AT2G27760 27.852 4.30e-18 84.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g0982 14 11134600 11141817 Glsi14g0982 14 11134600 11141817 ECH