Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0975 ATGGGTTCGCCATTCAAGCCAATTTCATGCTCTAGAAAAACCACTTATAGATTAGAAACCAAGAACTTATCCTACAGATTGTGCAGCCAACTTGATGAATTCAAAAGCCTTTGTGGTGCGTCAAATCCAAGGAGAGGTACCAAGTTGGTTTTGAAAGATGTAAACTGTGAGGCAAGACCTGGGGAGCTTACTGCTATTGCTGGTCCTAGTGGAGCTGGGAAAACCACACTGCTGGAAATTCTTTCGGGGAGAGTATCCCCATGTAAGGTTTCTGGGCAAGTTCTTGTGAATCACAGGCCTATGGACGTGAACCGATTTAGAAGAACATCTGGGTATGTCACACAAGAAGATACCTTGTTCGCTTCACTCACCATTAGAGAAACACTCATGTATAGTGCTCTGCTGAGGCTTCCTGGTGCACGAAAAGTGGCTGCTGCTAGAGTTGCAGAGTTGATGAAGGAGCTCGGGCTGGATCACATCGCAGATTCAAGAATCGGTGGTGGTTGTGGTGGTGGAGGATCAAACCACGGCATATCAGGTGGGGAAAGGCGAAGAGTCTCCATTGGAGTTGATTTGGTTCATGACCCTGCAGTTATTTTGATTGATGAACCAACTTCAGGTTTGGATTCAGCCTCTGCTCTGAAAATAGTCTCATTGCTCAGACTAATGGCATTTAACCAAGGTAAGACAATAGTTTTAACTATCCACCAACCTGGGTTCCGAATCATAGAGCTATTTGATCGCCTTGTTTTGCTTTCGGATGGATTTGTCATGCATAATGGGTCGTTGAATCTTCTTGAGGCTAGACTCAAGTTAGCTGGGCATCACATTCCCCGCCATGTCAATGTCCTCGAATTCGCCCTTGATGTCATGGGAAGCTTGGTGATACAAACTTCAGATTCTGTCAACAACCAGTTTCTTCTCAGAGACAAAGAGGACCAAGTTCGTAAGATTAGGATGCAGTACTCTATGAATGTCAAAGAGAAGGCTCTTCAGTACCCTAATTCTCCAATGGAAGAGATTTTAATACTAGGACAAAGGTTTTGCTGCAACATATTCAGAACCAAGCAATTATTCCTCGCCAGAGTCATACAAGCCTTGGTAGCTGGATTTGTTCTGGGGACCATATTTTTGAATGTTGGCAGCCAAAACGATCAAGTAGCCTTACAAGCACGAAGTGGGTTTTTCGCTTTCAGCCTTACCTTCTTGTTATCTTCAACAACAGAAGGGCTGCCCATTTTCTTAGAAGAGAGAAGAACTCTGATGAAAGAGACCTCGAGAGGAGCTTATAGGGTTTCTTCCTATGTTTTGGCAAACACCCTTGTGTTCGTTCCTTTCCTTCTGATGATTGGTCTTCTATACACTACCCCAGTTTATTGGCTAGTAGGATTGAGGAAGGACATTGATGGGTTCCTATACTTTTCTCTAGTGGTTTGGTTGGTGGTCCTCATGTCAAATTCTCTCGTAGCTTGTTTCAGTGCTCTGGTGCCCAATTTCATCCTGGGAACCTCAGTGATTGCGGGGCTAATGGGTTCTTTCTTTCTGTTTTCAGGCTATTTCATATCTAAGGGAAACATACCCAGTTACTGGATTTTTATGCACTATATGAGTCTGTTCAAGTACCCATTTGAGTGTTTTATGATAAATGAGTATGGAGGGGAACAAGGGAAAACCAGATGCTTAGATATCAGGAACGGAGAATGTAGTTTGTCCGGAGTTGAGTTCTTAAGACGACAGGGTTTGAAAGAGTCGCATAAATGGAGCAATTTGGCTGTGATGTTGAGCTTCATAATTGGCTATAGAGTTCTTAGCTTTTTGATTCTGTGGTGTAGATGTTACAGAACCAGAAAATAA 1854 0.4326 MGSPFKPISCSRKTTYRLETKNLSYRLCSQLDEFKSLCGASNPRRGTKLVLKDVNCEARPGELTAIAGPSGAGKTTLLEILSGRVSPCKVSGQVLVNHRPMDVNRFRRTSGYVTQEDTLFASLTIRETLMYSALLRLPGARKVAAARVAELMKELGLDHIADSRIGGGCGGGGSNHGISGGERRRVSIGVDLVHDPAVILIDEPTSGLDSASALKIVSLLRLMAFNQGKTIVLTIHQPGFRIIELFDRLVLLSDGFVMHNGSLNLLEARLKLAGHHIPRHVNVLEFALDVMGSLVIQTSDSVNNQFLLRDKEDQVRKIRMQYSMNVKEKALQYPNSPMEEILILGQRFCCNIFRTKQLFLARVIQALVAGFVLGTIFLNVGSQNDQVALQARSGFFAFSLTFLLSSTTEGLPIFLEERRTLMKETSRGAYRVSSYVLANTLVFVPFLLMIGLLYTTPVYWLVGLRKDIDGFLYFSLVVWLVVLMSNSLVACFSALVPNFILGTSVIAGLMGSFFLFSGYFISKGNIPSYWIFMHYMSLFKYPFECFMINEYGGEQGKTRCLDIRNGECSLSGVEFLRRQGLKESHKWSNLAVMLSFIIGYRVLSFLILWCRCYRTRK 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0975 617 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 18 279 IPR003439 GO:0005524
Glsi14g0975 617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 271 IPR027417 -
Glsi14g0975 617 Pfam ABC-2 type transporter 340 551 IPR013525 GO:0016020|GO:0140359
Glsi14g0975 617 SMART AAA_5 60 256 IPR003593 GO:0016887
Glsi14g0975 617 CDD ABCG_EPDR 41 261 - -
Glsi14g0975 617 ProSitePatterns ABC transporters family signature. 178 192 IPR017871 GO:0005524|GO:0016887
Glsi14g0975 617 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 15 602 - -
Glsi14g0975 617 Pfam ABC transporter 51 206 IPR003439 GO:0005524
Glsi14g0975 617 Gene3D - 11 280 IPR027417 -
Glsi14g0975 617 FunFam ABC transporter G family member 10 35 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0975 Glsi-ChrGlsi14 11115601 11117454 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0975 41 266 Calmodulin-binding Proteins AT2G36910 30.638 2.50e-13 71.6