Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0974 ATGTCGGTGCTTAGTCTGAACTTGCTTTGCATTTTACTGCGGTCAAGTTTTGATATTTTGTTGCTTCCTGTTCCCGTGAGAGACCGGATAACTTCAAGTCAATATGTGAAATTGTGGTTGTTCCTCTTTTCTCCTTCTCCGTGTTCTGCAAACTCCACTGATGCCGGGGGAGGCTTGGTTTTTAAAAATACTGGAAGAAAAGGATCTGTCTCAGTCACACGACCAGCCGAAGTTGATGTTGAGGTTTCAGACATTCAGAATGTCACCCTTTATACTTACAAAGAACTGCGAATTGCCACCGAAGGTTTTAGTCCAGCAAACAAGATTGGGCAGGGTGGATTTGGATCTGTCTATAAGGGAAAGTTAAGAAATGGTACTCTGGCTGCTATAAAAGTGTTGTCAGCCGACTCAAAACAAGGGGTTCGGGAATTCTTGACTGAAATCAAGGTGATCACTAGTATAGAGCATGAGAACCTAGTCAAATTGTACGGATGTTGTGTGGAAGAAAATCACCGGATTTTGGTATATGGCTATCTCGAGAACAACAGCCTAGCACAAACACTTCTTGGTGGAGGCCATAGTAGCATCCAATTCAATTGGCATTTACGGAGGAACATTTGCATCGGTGTTGCACGGGGCCTAGCATTCCTTCATGAGGATGTTGAGCCACATATCATTCATAGAGACATTAAAGCAAGTAATATACTACTTGACAAAGACCTGCAGCCCAAAATTTCTGATTTTGGGCTTGCAAAGCTTATCTCACCAAACTTGACCCATATTAGTACACGTGTCGCTGGAACAGCTGGTTATTTGGCACCAGAGTATGCAATACGAAATCAAGTGACAAGAAGATCAGATGTCTATAGTTTTGGAGTTCTACTACTAGAAATTGTTAGCGGGAGGTGTAACACAAACAGGCGGTTACCTGTTGAAGAACAGTATCTTCTTCCATCGGCATGGAATTTGTATGAAAGGGGGGAGCTGGAGGGACTGGTGGATTCATTTCTAGATGGCGACTTCAATGTTGAGGAGGCATGTAGGTTTTGTAAGATTGGTCTCCTCTGCACTCAGGATTCTCCTCAGCTCCGACCATCAATGTCTAGTGTGCTTGACATGCTGACAGGTGAGGTAGATGTGAACGACAAGAAGATAACAAAACCAGGCATACTATTTGAGTTTGTAGATACCAAAGTTGAAGGGAATCAGAAAGCCAAGGCTGAAATGGAAAACACATCTTCCTCTGCTTGCTTAGGGAAGCAAGATGATTCATCTTCATCAGGAACTGCGAACTCTTTTGCTACCATGACCTTCACTTCAATTTATGACCGAAGCAATTGA 1341 0.4303 MSVLSLNLLCILLRSSFDILLLPVPVRDRITSSQYVKLWLFLFSPSPCSANSTDAGGGLVFKNTGRKGSVSVTRPAEVDVEVSDIQNVTLYTYKELRIATEGFSPANKIGQGGFGSVYKGKLRNGTLAAIKVLSADSKQGVREFLTEIKVITSIEHENLVKLYGCCVEENHRILVYGYLENNSLAQTLLGGGHSSIQFNWHLRRNICIGVARGLAFLHEDVEPHIIHRDIKASNILLDKDLQPKISDFGLAKLISPNLTHISTRVAGTAGYLAPEYAIRNQVTRRSDVYSFGVLLLEIVSGRCNTNRRLPVEEQYLLPSAWNLYERGELEGLVDSFLDGDFNVEEACRFCKIGLLCTQDSPQLRPSMSSVLDMLTGEVDVNDKKITKPGILFEFVDTKVEGNQKAKAEMENTSSSACLGKQDDSSSSGTANSFATMTFTSIYDRSN 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0974 446 ProSiteProfiles Protein kinase domain profile. 103 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0974 446 SMART serkin_6 103 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0974 446 Pfam Protein kinase domain 106 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0974 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Glsi14g0974 446 Gene3D Phosphorylase Kinase; domain 1 73 178 - -
Glsi14g0974 446 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 55 415 - -
Glsi14g0974 446 CDD STKc_IRAK 109 376 - -
Glsi14g0974 446 Gene3D Transferase(Phosphotransferase) domain 1 179 388 - -
Glsi14g0974 446 FunFam cold-responsive protein kinase 1 74 178 - -
Glsi14g0974 446 FunFam cold-responsive protein kinase 1 179 390 - -
Glsi14g0974 446 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Glsi14g0974 446 SUPERFAMILY Protein kinase-like (PK-like) 82 374 IPR011009 -
Glsi14g0974 446 MobiDBLite consensus disorder prediction 410 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0974 Glsi-ChrGlsi14 11110668 11114848 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0974 74 397 Receptor kinase-like Gene Family AT1G56120 53.049 1.63e-105 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi14g0974 Pkinase 1.7e-46 CL0016