Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0954 ATGGCGAGGATTGGACCAATCTCTCAGGACTGGGAGCCAGTGGTGATTCGGAAGAAGGCACCAACTGCGGCGGCCAAGAAGGATGAGAAAGTTGTCAACGCCGCTCGTCGCTCCGGCGCCGAGATTGAAACCCTGAAAAAAGCAAGTGCTGGGACAAATAAAGCTACCTCTAGCAGCACTTCTTTGAACACAAGGAAGCTTGATGAAGAAACTGAGAATCTTCACCATGATCGGGTACCAACTGAATTGAAGAAAGCCATCATGCAGGCTCGGATGGATAAGAAACTCACGCAATCTCAACTAGCTCAGATTATAAATGAAAAGCCCCAAATCATACAGGAGTACGAATCTGGTAAAGCCATTCCAAATCAACAAATAATAGGAAAACTAGAGAGAGCTCTTGGTGCAAAACTTCGCGGAAAGAAATAA 429 0.4592 MARIGPISQDWEPVVIRKKAPTAAAKKDEKVVNAARRSGAEIETLKKASAGTNKATSSSTSLNTRKLDEETENLHHDRVPTELKKAIMQARMDKKLTQSQLAQIINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0954 142 MobiDBLite consensus disorder prediction 49 64 - -
Glsi14g0954 142 ProSiteProfiles Cro/C1-type HTH domain profile. 87 141 IPR001387 -
Glsi14g0954 142 SMART mbf_short4 86 141 IPR001387 -
Glsi14g0954 142 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 9 142 - -
Glsi14g0954 142 MobiDBLite consensus disorder prediction 46 74 - -
Glsi14g0954 142 CDD HTH_XRE 85 135 IPR001387 -
Glsi14g0954 142 Pfam Multiprotein bridging factor 1 9 79 IPR013729 -
Glsi14g0954 142 Gene3D - 71 142 IPR010982 GO:0003677
Glsi14g0954 142 Pfam Helix-turn-helix 87 137 IPR001387 -
Glsi14g0954 142 SUPERFAMILY lambda repressor-like DNA-binding domains 80 138 IPR010982 GO:0003677
Glsi14g0954 142 FunFam Multiprotein bridging factor 1 71 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0954 Glsi-ChrGlsi14 10987188 10990056 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Glsi14g0954 MBF1 8.1e-24 No_clan