Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0938 ATGGGATACTTCTTGTTGATGCTATGCTTCTCTACCTTCTTGTATGCTATTTCTGCTTTGAACCCAGATGGCATCACTCTGCTTTCACTCTTGAGGCATTGGACGTTTGTGCCTCCTCCCATAAACTCGAGCTGGAATGCCTCTGATCCTACTCCATGCTCATGGGTAGGAGTCCAATGCGACAATGCCCACAATGTAGTTTCCCTTAATTTAACTTCTTATTTCATTTTGGGTCAGTTAGGGCCTGAAATAGCACAGTTGAGTCACTTGCAGACTCTTGTGTTGTATTCTAACAGTCTCTCAGGAAGAATACCCCCTGAGCTAGGTAATTGCAGCATGCTTGAGTATTTGGATCTTTCTGTAAACAATTTTAGCGGAGAAATACCAAATGGCTTGAGTAATTGTAGTATGCTTCAGCACTTGGATCTTTCTGAGAATAACCTTAGAGGACAAATTCCAAATGGCTTGAAAAACTTGCATAATTTGCAGTATTTTAACTTCTATTCCAATCTACTGAGCGGTGAAATTCCTGATTACTTGTTTGAAATTCCTCACTTACAGCATGTTTTTCTAGAAAATAACAATCTAAGTGGTCCCATCCCTACGAATATTGGCAACAGCACCAAGCTTTTGAGGCTGTATTTGTACAATAATCAGTTGTCTAGGACAATTCCCTCATCCATTGGAAACTGCAGTATATTAGAGGAATTGTTTCTGGGTTACAACCAATTACAGGGGATTTTGCCTGAAAGTCTTAACAATCTCCAGAATCTTGTTACTTTTGTAGTCAACTACAATAATCTCGAGGGTACAATTCCATTAGGTTCTGGCAATTGTAAAAGTTTATATAAATTGGATTTTTCATTCAATGTATTCAATGGAGGTATTCCTTCAGGGTTGTGCAATTGCAGTGGTTTGACAAAAATTTTAGCCGTCAATAGCAACTTAGTAGGCAGCATCCCATCTTCCTTTGGCCTACTAAGTGAACTTTCTATTCTCAGCCTTCCTATGAACCATTTGTCTGGACAAATACCTCCAGAAATTGGTAGATGCAAGTCTTTGACAGAGTTGATTTTACATACCAATCAACTTGAGGGAGAAATTCCTAGTGAAGTGGGAATGCTAAGTGAATTGCAAGATCTTCGATTGTATTCCAACCAGTTGACGGGTGAAATCCCTCTTAGCATATGGAAAATTCCAGGTCTTAAGTATATCCATTTGTACAATAATAGCTTTTATGGGGAGCTACCTTTAGAAATCACAGAGCTAAAGCAGCTACAAAATTTAACCTTGCATAACAACCACTTCTCTGGAGCTATACCTCAGAGCTTGGGAATTAATAGTAGTTTAGTGGACTTGGACTTCACAAATAACAAATTCTCTGGTCACATCCCGCCAAATCTTTGTTTTGGAAAGAAAATAGTGAGGCTGGTTATGGGTATTAATCAACTGCAAGGTAGCATACCTCCTGACATGGGAAGTTGTACAACCCTCACAAGATTGATTTTAAAAGCAAACAACTTCACAGGAGCTCTTCCCAATTTTGAAAATAATATGAATCTAGAATACATGGATATCAGCAATAACAGCATCAGCGGAGCAATTCCATCTAGTGTAGGAAACTGCAAAAACCTCTCTAGTATTGATTTGTCCATGAACAAACTTGTGGGGATCATACCATCAGAGCTAGGAAACCTTGTGAGTCTTCGAAGGTTGAAGCTTTCTGACAATGAGTTGGAAGGTCCTTTGCCACCGCGCCTGTCAAATTGTAACAAAATGGAATACTTTGATGTCGGATTCAATTTCCTAAATGGTTCATTGCCATCAAGTTTGAGCAACTGGTCGGGGCTATCTACTTTATTGTTAAGAGAGAATCATTTTACAGGGGGTATCCCAACATTCTTATCAAATTTTGGAAAGCTTTCTGAGCTTCAACTTGGGGGGAATTTGTTTGGAGGTGAAATTCCTAGATCACTTGGAACATTGCAGAATCTGCTTTATGGGTTGAATCTTAGTGCTAATGGGTTGACAGGTGAGATTCCTTCAGAGATTGGAAAACTGAACATGCTACTAAGGCTGGATCTCTCTCTTAACTATCTAATGGGAAATATAAAAGTTCTTGAACAGCTGTCTTCATTGGTTGAAGTCAACATCTCCTTCAATTCCTTTGATGGTCCTGTACCAGATACACTAATGAAGTTGCTGAAATCTTATCCATCATCATTCTTAGGCAATCCCGGCTTATGTGTTAGTTGTTCAACCGTAAATAGCTTAAATTGCCCCAAGAATTTCAGTTTGAAGCCTTGTGACAACATATCAAGTCATCGGAAAGGATTGAGTAAACTTAAAATCATAATGATAGCACTGGGATCCTCATTTTTTGTTATTTTTCTGTTGCTGGGACTAGTTTTCATGTTTCTCTTTGGCAGAAGATCTAAACAGGATGTCCTAATCTTTCCTAAACATGATTCATCTTCCTTTCTCAAGAAAGTGATGGAGGCTACAGAGAACCTAAATGATCGGTATATTATTGGCAGAGGAGCCCATGGAATTGTGTATAAAGTTTCACTAGGTCCAGGAAATACTTTTGCTGTAAAGAAACTTGCATTTGCCAACAAGGAAGGGCAGAGCAAAAGTATGAGCAGAGAACTTGAGACCGTTGGGAAGGTTAAGCATCGAAACCTGGTCAGATTGAAAAACTTCTGGTTGAGAAAAGACTATGGTCTCATCTTGTACAGCTATATGGAAAATGGAAGCCTTCATGATGTTCTGCATGAAATGAGTCCGCGACCTTCCTTATTGTGGAGTGTTCGGTATAAGATAGCAGTTGGAATTGCACATGGACTGGCATATCTCCATTATGACTGTGATCCTATCATAGTCCACAGAGACATCAAACCAAAGAATATACTTTTAGATTCTGATATGGAGCCTCATATCGCCGATTTTGGTATTGCCAAGGTTTTGGGTCAGTCCTTTGCTTCAACACAGTCTTTAGCAGTTCCTGGCACTGTGGGCTATATTGCACCAGAGAATGCGTATACAACATTAGTGAGCAGGAAATCTGATGTATATAGCTATGGTGTAGTTTTGGTGGAGCTAATTACCAGAAAGAAGGTGTTGGATGCTTCATTTATGGAGGGAACAGATTTAGTGGGGTGGGTTAAATCTGTATGGGAAGAAACGGGAGAAATTGATAGTATTGTTGATTCAAACCTTGAAGAGGAGCTTCTAGATTCAAATGTAAGGGAACAAGTTGTAAAAGTGCTTTTGGTGGCGTTGGAATGTACGGAGAAGAATCCAAGTAAGAGACCAACGATGAGAGAAGTGATCAAGCAATTGATTATTAGAAGCAAATCTAGTGGCCAGAAGTAG 3375 0.3935 MGYFLLMLCFSTFLYAISALNPDGITLLSLLRHWTFVPPPINSSWNASDPTPCSWVGVQCDNAHNVVSLNLTSYFILGQLGPEIAQLSHLQTLVLYSNSLSGRIPPELGNCSMLEYLDLSVNNFSGEIPNGLSNCSMLQHLDLSENNLRGQIPNGLKNLHNLQYFNFYSNLLSGEIPDYLFEIPHLQHVFLENNNLSGPIPTNIGNSTKLLRLYLYNNQLSRTIPSSIGNCSILEELFLGYNQLQGILPESLNNLQNLVTFVVNYNNLEGTIPLGSGNCKSLYKLDFSFNVFNGGIPSGLCNCSGLTKILAVNSNLVGSIPSSFGLLSELSILSLPMNHLSGQIPPEIGRCKSLTELILHTNQLEGEIPSEVGMLSELQDLRLYSNQLTGEIPLSIWKIPGLKYIHLYNNSFYGELPLEITELKQLQNLTLHNNHFSGAIPQSLGINSSLVDLDFTNNKFSGHIPPNLCFGKKIVRLVMGINQLQGSIPPDMGSCTTLTRLILKANNFTGALPNFENNMNLEYMDISNNSISGAIPSSVGNCKNLSSIDLSMNKLVGIIPSELGNLVSLRRLKLSDNELEGPLPPRLSNCNKMEYFDVGFNFLNGSLPSSLSNWSGLSTLLLRENHFTGGIPTFLSNFGKLSELQLGGNLFGGEIPRSLGTLQNLLYGLNLSANGLTGEIPSEIGKLNMLLRLDLSLNYLMGNIKVLEQLSSLVEVNISFNSFDGPVPDTLMKLLKSYPSSFLGNPGLCVSCSTVNSLNCPKNFSLKPCDNISSHRKGLSKLKIIMIALGSSFFVIFLLLGLVFMFLFGRRSKQDVLIFPKHDSSSFLKKVMEATENLNDRYIIGRGAHGIVYKVSLGPGNTFAVKKLAFANKEGQSKSMSRELETVGKVKHRNLVRLKNFWLRKDYGLILYSYMENGSLHDVLHEMSPRPSLLWSVRYKIAVGIAHGLAYLHYDCDPIIVHRDIKPKNILLDSDMEPHIADFGIAKVLGQSFASTQSLAVPGTVGYIAPENAYTTLVSRKSDVYSYGVVLVELITRKKVLDASFMEGTDLVGWVKSVWEETGEIDSIVDSNLEEELLDSNVREQVVKVLLVALECTEKNPSKRPTMREVIKQLIIRSKSSGQK 1124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0938 1124 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 806 914 - -
Glsi14g0938 1124 SMART LRR_typ_2 423 447 IPR003591 -
Glsi14g0938 1124 SMART LRR_typ_2 375 399 IPR003591 -
Glsi14g0938 1124 SMART LRR_typ_2 234 254 IPR003591 -
Glsi14g0938 1124 SMART LRR_typ_2 159 183 IPR003591 -
Glsi14g0938 1124 SMART LRR_typ_2 327 351 IPR003591 -
Glsi14g0938 1124 SMART LRR_typ_2 638 662 IPR003591 -
Glsi14g0938 1124 SMART LRR_typ_2 87 111 IPR003591 -
Glsi14g0938 1124 SMART LRR_typ_2 566 590 IPR003591 -
Glsi14g0938 1124 SMART LRR_typ_2 255 279 IPR003591 -
Glsi14g0938 1124 SMART LRR_typ_2 208 231 IPR003591 -
Glsi14g0938 1124 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 472 758 - -
Glsi14g0938 1124 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 371 1114 - -
Glsi14g0938 1124 Gene3D Ribonuclease Inhibitor 23 176 IPR032675 -
Glsi14g0938 1124 Gene3D Transferase(Phosphotransferase) domain 1 915 1123 - -
Glsi14g0938 1124 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 171 345 - -
Glsi14g0938 1124 Pfam Leucine Rich Repeat 114 135 IPR001611 GO:0005515
Glsi14g0938 1124 Pfam Leucine Rich Repeat 138 159 IPR001611 GO:0005515
Glsi14g0938 1124 SUPERFAMILY Protein kinase-like (PK-like) 818 1116 IPR011009 -
Glsi14g0938 1124 Pfam Protein kinase domain 843 1113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0938 1124 ProSitePatterns Serine/Threonine protein kinases active-site signature. 960 972 IPR008271 GO:0004672|GO:0006468
Glsi14g0938 1124 Gene3D Ribonuclease Inhibitor 375 445 IPR032675 -
Glsi14g0938 1124 Pfam Leucine rich repeat N-terminal domain 21 61 IPR013210 -
Glsi14g0938 1124 SMART serkin_6 838 1116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0938 1124 SUPERFAMILY RNI-like 245 556 - -
Glsi14g0938 1124 Gene3D Ribonuclease Inhibitor 177 275 IPR032675 -
Glsi14g0938 1124 Gene3D Ribonuclease Inhibitor 276 374 IPR032675 -
Glsi14g0938 1124 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 20 170 - -
Glsi14g0938 1124 ProSitePatterns Protein kinases ATP-binding region signature. 844 867 IPR017441 GO:0005524
Glsi14g0938 1124 Gene3D Ribonuclease Inhibitor 446 757 IPR032675 -
Glsi14g0938 1124 FunFam Serine/threonine-protein kinase-like protein CCR4 915 1124 - -
Glsi14g0938 1124 ProSiteProfiles Protein kinase domain profile. 838 1116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0938 1124 SUPERFAMILY L domain-like 21 308 - -
Glsi14g0938 1124 FunFam Leucine-rich receptor-like protein kinase family protein 346 442 - -
Glsi14g0938 1124 Pfam Leucine rich repeat 520 579 IPR001611 GO:0005515
Glsi14g0938 1124 SUPERFAMILY L domain-like 466 772 - -
Glsi14g0938 1124 Gene3D Phosphorylase Kinase; domain 1 807 914 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0938 Glsi-ChrGlsi14 10830024 10833497 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0938 11 1114 Receptor kinase-like Gene Family AT1G73080 51.882 0.0 1065
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi14g0938 Pkinase 4.1e-44 CL0016