Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi14g0936 | ATGGCATCACTGCTTGCGTTCTTAGCTGCTTCCTCTTTCTGTTCTTCTTCTGACATTCAACTCCATTTCCATCTCCTTTTAAGTTTCTCCTTGACTCTTGCCAATGCCAAAACATGGCCTTTCCAACTGCAACAAGGTGACTGCTTTCTAATGAAGCATTTCTTGTTGATGCTATGCTTCTCTACCTTCTTGTATTGTATTTCTGCTTTGAGCATAGATGGGATCACGCTGCTCTCACTCTTGAGGCATTGGACGTTTGCGCCTCCTCCCATAAACTCGAGCTGGAATGCCTCTGATCCTACTCCATGCTCATGGGTAGGAGTCCAATGCGACTATGCCCACAATGTAGTTTCTCTTAATTTAACTTCCTATTCCATTTTGGGTCAGTTGGGGCCTGAAATAGCACAGTTGAGTCACTTGCAGACTCTTGTGTTGTATTCTAACAGTCTCTCAGGAAGAATACCCCCTGAGCTAGGTAATTGCAGAATGCTTGAGCATTTGGATCTTTCTTTAAACAATTTTAGCGGAGAAATTCCAAATGGCTTGAGTAATTGTAGTATGCTTCAGCACTTGGATCTTTCTGAGAATAACCTTAGAGGACAAATTCCAAATGGCTTGAAAAACTTGCATAATTTGCAGTATTTTAACTTCTATTCCAATCTACTGAGCGGTGAAATTCCTGATTACTTATTTGAAATTCCTCACTTAGAACATGTGTTTCTGGAAAATAACAATCTAAGTGGTCCTATCCCTACAAATATTGGCAACAGCACCAAGCTTTTGAGGCTGTATTTGTACAATAATCAGTTGTCTGGGACGATTCCCTCATCCATTGGAAACTGCAGTATATTAGAGGAATTGTTTCTGGGTGAGAACCAATTACAGGGGATTTTGCCTGAAAGTCTCAACAATCTCGAGAATCTTGTTTATTTTGATGTCAACCATAATAATCTTAAGGGTACAATTCCATTAGGTTCTGGCAATTGTAAGCGTTTATACTTTTTGGATTTGTCATTCAATGTATTCAATGGAGGTATTCCTTCAGGATTGGGGAATTGCAGTGGTTTGACAAAATTTTTTGCTGTCAATAGCAACCTAGTAGGCAGCGTCCCATCTTCCTTAGGCCTGCTAACTAAACTCAATATTCTTCGCCTTCCTGAGAACCATTTGTCTGGACAAATACCTCCAGAAATTGGTAGATGCAAGTCTTTGCAAGAGTTGAATTTATATTCCAATCAACTTGAGGGAGAAATTCCTAGTGAATTGGGAATGCTAAGTGAATTGCAAGATCTTCGATTGTATTCCAACAAGTTGACGGGTGAAATCCCTCTTAGCATATGGAAAATTCCAGGACTTCAGTATATCCATTTGTACAATAATAGTTTTTATGGGGAGCTACCTTTAGAAATCACAGAGCTAAAGCAGCTACAAAATTTAACCTTGCATAACAACCTATTCTCCGGAGCTATACCTCAAAGCTTAGGAATAAACAGTAGTTTAGTGGATTTGGACTTCACAAACAACAAATTCTCTTGTCAAATCCCGCCAAATCTTTGTTTTGGAAAGAAATTAGTGAGAATGGTTATGGGTATTAATAAACTGCAAGGTAGCATACCTCCTGACATAGGAAGTTGTACAACTCTCACAAGATTGATTCTAAAAGCAAACAACTTCACAGGAGCTCTTCCCGATTTTGAAAGTAATATGAATCTTGAATACATGGATATCAGCAATAACAGCATCAGCGGAGCAATTCCATCAAGTGTAGGAAACTGCAAAAACCTCACTAGTATTGATTTTTCCATGAACAAACTTGTAGGGCTTATACCGTCAGAGCTAGGAAACCTTGTGAGTCTTCGCAGGTTGAAGCTTTCTGACAATGAGTTGGAAGGTCCTCTGCCACCCCGCCTCTCAAATTGTAACAAAATGGAATACTTTGATGTCGGATTCAATTTCCTAAATGGTTCAGTGCCATCAAGTTTGAGCAAATGGACGGGGCTATCTACCTTAATTTTAAGAGAGAATCATTTTACAGGGGGTATCCCAGCATTCTTATCAAATTTTGAAAATCTTTATGAGCTACAACTTGGAGGAAATTTGTTTGGAGGTGAAATTCCTAGATCGATTGGAACATTGCAGAATCTGCTCTATGGGTTCAATGTTAGTGCTAATGGGTTGACAGGTGTGGTTCCTTCAGAGATTGGAAAACTGAAAATGCTACTAAGACTGGATCTCTCTCTTAACAATCTGACGGGAAGCATAAAAGTTATTGAACAGCTGTCTTCATTGGTTGAAGTCAACATCTCCTTCAATTTCTTTGATGGTCCTGTACCGGATAAACTGATGAAGTTGCTGAATTCTTATCCATCATCATTCTTGGGCAATCCCGGCCTATGTTTTAGTTGTTCAACCTTAAATAGCTTAAATTGCTCTAACAATTTCAGTTTGAAGCCTTGTGACAACATATCAAGTCATCGGAAAGGATTGAGTAAACTTAAAATCATAATGATAGCACTTGGATCCTCATTTTTTGTTACTTTTCTGTTGCTAGGACTAGTTTTCATGTTTCTCTTTGGCGGAAGATCTAAACAGGATGTCCTAATCTTTCCTAAACATGATTCATCTTCCTTTCTCAAGAAAGTGATGGAGGCTACAGAGAACCTAAATGATCGGTATATTATTGGCAGAGGAGCCCATGGGGTTGTTTATAAAGTTTCACTAGGTCCAGAAAATATTTTTGCTCTAAAGAAACTTGCATTTGCCAACAAGGAAGGGCAGAGCAAAAGCATGAGCAGAGAACTTGAGACTGTTGGGAAGGTTAAGCATCGAAACCTGGTCAGATTGAAAAACTTCTGGTTGATAAAAGACTATGGTCTCATCTTGTACAGCTATATGGAAAATGGAAGCCTTCATGATGTTCTTCATGAAATGAGTCCGCTACCTTCCTTAGTGTGGAGTGTTCGGTATAAGATAGCTGTTGGAATTGCACATGGACTGGCATATCTCCATTATGACTGTGATCCTATCATAGTCCACAGAGACATCAAACCAAAGAATATACTTTTAGATTCTGATATGGAGCCTCATATCGCTGATTTTGGTATTGCCAAGGTTTTGGATCAGTCCCTTGCTTCAACGCAGTCTTCAGCGGTTCCTGGTACAGTGGGGTATATTGCACCAGAGAATGCATATACAACGTTAGTGAGCACGAAATCTGATGTATATAGTTATGGTGTAGTTTTGGTGGAGCTAATAACCAGAAAGAAGGTGTTGGATGCTTCATTAATGGAGGGAACAGATATAGTGGGGTGGGCTAAATCTTTATGGGAAGAAACAAGAGAAATTGATAGTATTGTTGATTCAAGCCTTGCGGAGGAGCTTTTGGATTCAAATGTAAGGGAACAAGTTGTACGAGTGTTTTTAGTGGCATTGGAATGTACTGAGAAGGATCCAAGTAAGAGACCAACGATGAGAGAAGTGACCAATCAATTGATTATTAGAAGCAAATCTAGTGGCCTCAAGTAG | 3525 | 0.3932 | MASLLAFLAASSFCSSSDIQLHFHLLLSFSLTLANAKTWPFQLQQGDCFLMKHFLLMLCFSTFLYCISALSIDGITLLSLLRHWTFAPPPINSSWNASDPTPCSWVGVQCDYAHNVVSLNLTSYSILGQLGPEIAQLSHLQTLVLYSNSLSGRIPPELGNCRMLEHLDLSLNNFSGEIPNGLSNCSMLQHLDLSENNLRGQIPNGLKNLHNLQYFNFYSNLLSGEIPDYLFEIPHLEHVFLENNNLSGPIPTNIGNSTKLLRLYLYNNQLSGTIPSSIGNCSILEELFLGENQLQGILPESLNNLENLVYFDVNHNNLKGTIPLGSGNCKRLYFLDLSFNVFNGGIPSGLGNCSGLTKFFAVNSNLVGSVPSSLGLLTKLNILRLPENHLSGQIPPEIGRCKSLQELNLYSNQLEGEIPSELGMLSELQDLRLYSNKLTGEIPLSIWKIPGLQYIHLYNNSFYGELPLEITELKQLQNLTLHNNLFSGAIPQSLGINSSLVDLDFTNNKFSCQIPPNLCFGKKLVRMVMGINKLQGSIPPDIGSCTTLTRLILKANNFTGALPDFESNMNLEYMDISNNSISGAIPSSVGNCKNLTSIDFSMNKLVGLIPSELGNLVSLRRLKLSDNELEGPLPPRLSNCNKMEYFDVGFNFLNGSVPSSLSKWTGLSTLILRENHFTGGIPAFLSNFENLYELQLGGNLFGGEIPRSIGTLQNLLYGFNVSANGLTGVVPSEIGKLKMLLRLDLSLNNLTGSIKVIEQLSSLVEVNISFNFFDGPVPDKLMKLLNSYPSSFLGNPGLCFSCSTLNSLNCSNNFSLKPCDNISSHRKGLSKLKIIMIALGSSFFVTFLLLGLVFMFLFGGRSKQDVLIFPKHDSSSFLKKVMEATENLNDRYIIGRGAHGVVYKVSLGPENIFALKKLAFANKEGQSKSMSRELETVGKVKHRNLVRLKNFWLIKDYGLILYSYMENGSLHDVLHEMSPLPSLVWSVRYKIAVGIAHGLAYLHYDCDPIIVHRDIKPKNILLDSDMEPHIADFGIAKVLDQSLASTQSSAVPGTVGYIAPENAYTTLVSTKSDVYSYGVVLVELITRKKVLDASLMEGTDIVGWAKSLWEETREIDSIVDSSLAEELLDSNVREQVVRVFLVALECTEKDPSKRPTMREVTNQLIIRSKSSGLK | 1174 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi14g0936 | 1174 | SUPERFAMILY | L domain-like | 73 | 359 | - | - | |
| Glsi14g0936 | 1174 | FunFam | Serine/threonine-protein kinase-like protein CCR4 | 965 | 1174 | - | - | |
| Glsi14g0936 | 1174 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 326 | 524 | - | - | |
| Glsi14g0936 | 1174 | Gene3D | Ribonuclease Inhibitor | 73 | 226 | IPR032675 | - | |
| Glsi14g0936 | 1174 | Pfam | Protein kinase domain | 893 | 1163 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Glsi14g0936 | 1174 | SMART | LRR_typ_2 | 425 | 449 | IPR003591 | - | |
| Glsi14g0936 | 1174 | SMART | LRR_typ_2 | 377 | 401 | IPR003591 | - | |
| Glsi14g0936 | 1174 | SMART | LRR_typ_2 | 209 | 233 | IPR003591 | - | |
| Glsi14g0936 | 1174 | SMART | LRR_typ_2 | 305 | 329 | IPR003591 | - | |
| Glsi14g0936 | 1174 | SMART | LRR_typ_2 | 473 | 497 | IPR003591 | - | |
| Glsi14g0936 | 1174 | SMART | LRR_typ_2 | 616 | 640 | IPR003591 | - | |
| Glsi14g0936 | 1174 | SMART | LRR_typ_2 | 284 | 304 | IPR003591 | - | |
| Glsi14g0936 | 1174 | SMART | LRR_typ_2 | 137 | 161 | IPR003591 | - | |
| Glsi14g0936 | 1174 | SMART | LRR_typ_2 | 258 | 281 | IPR003591 | - | |
| Glsi14g0936 | 1174 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 184 | 274 | - | - | |
| Glsi14g0936 | 1174 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 413 | 1163 | - | - | |
| Glsi14g0936 | 1174 | Gene3D | Ribonuclease Inhibitor | 567 | 819 | IPR032675 | - | |
| Glsi14g0936 | 1174 | Gene3D | Ribonuclease Inhibitor | 326 | 566 | IPR032675 | - | |
| Glsi14g0936 | 1174 | ProSitePatterns | Protein kinases ATP-binding region signature. | 894 | 916 | IPR017441 | GO:0005524 | |
| Glsi14g0936 | 1174 | Gene3D | Ribonuclease Inhibitor | 227 | 325 | IPR032675 | - | |
| Glsi14g0936 | 1174 | Gene3D | Phosphorylase Kinase; domain 1 | 859 | 964 | - | - | |
| Glsi14g0936 | 1174 | SUPERFAMILY | Protein kinase-like (PK-like) | 871 | 1166 | IPR011009 | - | |
| Glsi14g0936 | 1174 | FunFam | LRR receptor-like serine/threonine-protein kinase RPK2 | 857 | 964 | - | - | |
| Glsi14g0936 | 1174 | FunFam | Leucine-rich repeat receptor-like kinase | 75 | 183 | - | - | |
| Glsi14g0936 | 1174 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1010 | 1022 | IPR008271 | GO:0004672|GO:0006468 | |
| Glsi14g0936 | 1174 | SUPERFAMILY | L domain-like | 523 | 779 | - | - | |
| Glsi14g0936 | 1174 | ProSiteProfiles | Protein kinase domain profile. | 888 | 1166 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Glsi14g0936 | 1174 | SMART | serkin_6 | 888 | 1166 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Glsi14g0936 | 1174 | Pfam | Leucine rich repeat | 570 | 629 | IPR001611 | GO:0005515 | |
| Glsi14g0936 | 1174 | Pfam | Leucine rich repeat | 259 | 318 | IPR001611 | GO:0005515 | |
| Glsi14g0936 | 1174 | SUPERFAMILY | L domain-like | 283 | 518 | - | - | |
| Glsi14g0936 | 1174 | Pfam | Leucine rich repeat N-terminal domain | 73 | 111 | IPR013210 | - | |
| Glsi14g0936 | 1174 | Gene3D | Transferase(Phosphotransferase) domain 1 | 965 | 1171 | - | - | |
| Glsi14g0936 | 1174 | FunFam | Leucine-rich repeat receptor-like protein kinase PEPR1 | 525 | 808 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi14g0936 | Glsi-ChrGlsi14 | 10776419 | 10780108 | Dispersed/Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi14g0936 | 61 | 1164 | Receptor kinase-like Gene Family | AT1G73080 | 50.984 | 0.0 | 1047 |
Transcription factors information