Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0933 ATGTTGAGAGAAACTGCTCGGGAATCCGGAAGTGGTTTTGGTGAGAAAAGCCGGGAATATGTTTCTGCATTGAGCTCTGATGGAATGATTCTGATCTCCCTCTTAACGCACTGGAAATTTGTGCCTCCTCCTATAAATTTGAGCTGGAATGCCTCTAATTCTACTCCATGCTCATGGGTAGGAATCCAGTGCGACAATTCCCACAATGTAGTTTCTCTGAACCTCACTTCTTATTCCGTTTTGGGTAATTGCAGCAAGCTTGAGTATTTGGATCTTTCTGCAAACAATTTTAGCGGAGAAATACCAAATGTCTTGAGTAATTATAGCATGCTTCAGCACTTGGATATTTCTAGAAACAAATTTAGCGGACAAATTCCAAATAGCTTGGAAAACTTGCAAAAATTGCAGTATTTCAACATCTATTCCAATCTGTTCAGTGGTCGAATTCCTGAATCCTTATTTCAAATTCCCCACTTGGAATTTGGTAAATTGAAGAAACTGGAATTGGCTGAGAACCAATTGAAGGGAAATTTGCCAGACAGTCTTAACAATCTACAGAATCTAGGTTCTTTAGATGTCAGCTATAATGGTCTTTGGGGTACCATTATTCCATTGGGTTCTAGAAACTGCAAAAATTTGAACTTGTTGGACTTGTCATTCAATGCATTTAGCGGAGGCATTCCATCAAGCTTGGGGAATTGTAGTGGACTAGAAAAACTTCTACTCATCCAGTCCAACTTGGAAGGTAGTATCCCACCAACTATAGGACTATTACATAAGCTTTCTAAACTTCACCTTCAAGAGAACCATCTTTCTGGGCAAATACCTTCAGAATTGGGCAACTGCAAGTCTTTGAAAGAGTTGCTTTTGTATTCCAATCAAATTGAGGGTGAAATTCCGCTGAGCGTTTGGAAGATTTCAAGTCTTGAACTTTTCCTTGCCTTAATCCAACTACAAGGTACCATACCTCCAAATGTGGGAAGTTGTCGAAGTCTTGCTAGGTTGATCCTTAGAGACAATAACTTCACAGGGTCTCTTCCAGATTTTGAACGTAACTTGAATCTTTACTACATAGACATTAGTAACAACAACCTCAGTGGGCCAATCCCCTCAAGTTTGGGAAACTGCACAAATCTTACCGATGTTAACTTGTCCATGAAAAAATTTACGGGACATGTACCCTCAGAGTTAGAAAACCTTGTAAATCTTAGGAGATTAAATCTTACTAACAACTACTTGGAAGGTCCTTTGCCATCTCAGTTGTCAAATTGTGCCCAAATGGAATACTTTTATGGGGGACTTAATTTCCTAAATGGATCAATTCCATCAAGCTTGAGAAGCTGGATGAGACTGTCTTCATTGATCTTGAGAGAGAATCATTTTACTGGTGGAATCCCAGATTTCCTACCAGAATTTGAAATGCTGTCTGATCTACAGCTTGGGGGGAACATGTTTGGAGGCGAAATTCCCAGATCAATTGGATCATTGCAGAATCTGCTTTATGGATTGAATCTAAGTGGAAATGGGTTAATCGGTGAACTTTCTTCAAAGATTGGGAAACTAAAAAAGCTGCTAAGGCTGGATTTGTCTCAGAACAATTTGATAGGAACTATAAAATTTCTTGGTGAACTCGTTTCCTTGGTGGAAGTCAATATCTCATACAATTCCTTTGAGGGTCCTGTACCAAAGACACTGTTGAACTTGCTCATTTCTTCCCCATCATCATTCTTGGGGCAGATCAGCAAAAGCATGAGCAGAGAGCTTGAAACCATAGGGAAGATTAGGCATCGAAATCTGGTCAGATTGGAAAACTTCTGGTTGAGAAAGGACTATGGCCTGATATTGTACAACTACATGGAAAATGGAAGCCTTAATGATGTTTTGCACGAAAAGAATCCACTAGCATCCATAGAGTGGAGTGTTCGGTATAAGATAGCAGTTGGAATTGCACATGGATTGGCATTTCTCCATTTTGACTCTGATCCTATCATAGTGTGTTGTGGATGA 2007 0.3966 MLRETARESGSGFGEKSREYVSALSSDGMILISLLTHWKFVPPPINLSWNASNSTPCSWVGIQCDNSHNVVSLNLTSYSVLGNCSKLEYLDLSANNFSGEIPNVLSNYSMLQHLDISRNKFSGQIPNSLENLQKLQYFNIYSNLFSGRIPESLFQIPHLEFGKLKKLELAENQLKGNLPDSLNNLQNLGSLDVSYNGLWGTIIPLGSRNCKNLNLLDLSFNAFSGGIPSSLGNCSGLEKLLLIQSNLEGSIPPTIGLLHKLSKLHLQENHLSGQIPSELGNCKSLKELLLYSNQIEGEIPLSVWKISSLELFLALIQLQGTIPPNVGSCRSLARLILRDNNFTGSLPDFERNLNLYYIDISNNNLSGPIPSSLGNCTNLTDVNLSMKKFTGHVPSELENLVNLRRLNLTNNYLEGPLPSQLSNCAQMEYFYGGLNFLNGSIPSSLRSWMRLSSLILRENHFTGGIPDFLPEFEMLSDLQLGGNMFGGEIPRSIGSLQNLLYGLNLSGNGLIGELSSKIGKLKKLLRLDLSQNNLIGTIKFLGELVSLVEVNISYNSFEGPVPKTLLNLLISSPSSFLGQISKSMSRELETIGKIRHRNLVRLENFWLRKDYGLILYNYMENGSLNDVLHEKNPLASIEWSVRYKIAVGIAHGLAFLHFDSDPIIVCCG 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0933 668 Gene3D Ribonuclease Inhibitor 25 204 IPR032675 -
Glsi14g0933 668 SMART LRR_typ_2 161 184 IPR003591 -
Glsi14g0933 668 SMART LRR_typ_2 185 210 IPR003591 -
Glsi14g0933 668 SMART LRR_typ_2 400 424 IPR003591 -
Glsi14g0933 668 SMART LRR_typ_2 132 156 IPR003591 -
Glsi14g0933 668 SMART LRR_typ_2 258 282 IPR003591 -
Glsi14g0933 668 ProSiteProfiles Protein kinase domain profile. 500 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0933 668 Pfam Leucine Rich Repeat 354 376 IPR001611 GO:0005515
Glsi14g0933 668 Pfam Leucine Rich Repeat 111 132 IPR001611 GO:0005515
Glsi14g0933 668 Pfam Leucine Rich Repeat 402 424 IPR001611 GO:0005515
Glsi14g0933 668 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 163 667 - -
Glsi14g0933 668 SUPERFAMILY L domain-like 53 311 - -
Glsi14g0933 668 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Glsi14g0933 668 Pfam Protein kinase domain 582 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0933 668 Gene3D Ribonuclease Inhibitor 500 572 IPR032675 -
Glsi14g0933 668 Gene3D Ribonuclease Inhibitor 433 499 IPR032675 -
Glsi14g0933 668 Gene3D Ribonuclease Inhibitor 205 431 IPR032675 -
Glsi14g0933 668 FunFam Receptor-like protein kinase 7 78 310 - -
Glsi14g0933 668 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 311 590 - -
Glsi14g0933 668 SUPERFAMILY Protein kinase-like (PK-like) 580 658 IPR011009 -
Glsi14g0933 668 SUPERFAMILY L domain-like 310 562 - -
Glsi14g0933 668 Gene3D Transferase(Phosphotransferase) domain 1 573 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0933 Glsi-ChrGlsi14 10743389 10753923 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0933 579 665 Receptor kinase-like Gene Family AT1G73080 59.091 2.42e-28 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi14g0933 Pkinase 1.3e-08 CL0016