Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0929 ATGGGGTTTGTGATGTCAAGCTCCAAACTTGTCTCTGTTTTCTTCTTTGGGTTTCTGGCTCTGAACTTCTTCACAGAGTTTGGATCAAGCGCCCAACTTATACCCGAAGATGAAGTGAAAGCTCTACAAGCAATCTCGGATAAACTGAAGAACGTGAATTGGAAAGTGACCCAGCGTTCTTGCAGCGGAGGTGGAGGATTTAAGAACATCGTTACTATAAAGGATAAAATCGTCAGCAATGTAACTTGCAATTGCACTTTCCAAAGTCGCACCGTTTGCCATGTTACCGACATTTTGCTGAAAGGTCAAAATGTATCTGGAGTTATACCCAGTGAATTTGGAAATCTCACTCGACTGAAACAACTTGATCTCACTCGAAACTATCTCAATGGCTCAATTCCAACGATTTTTACTCGCATCCCCATTGTCAATCTGTCCCTTTTGGGGAATCGAATTAGTGGTTCAATTCCAGCGGAACTTGGTGATATTGCTAGTCTGGAGGAGCTGATCTTGGAAGATAATCAGCTTGGAGGACCTCTTCCTCCCAACCTTGGAAATTTGAGCAACTTACGGAGATTACTTCTTTCTGCAAATAATTTCACAGGGACAATACCAGAAACATATGGAAAACTGAAGAACCTAACCGATTTTAGGATTGATGGCAGCACTTTATCAGGAAAGATACCAAGTTTCATTGGGAACTGGACCAAAATAGATATACTGAATATGCAGGGCACATCCATGGAAGGCCCAATTCCTTCCACCATATCTGAGTTGAAAAATGTGACTGAATTGAGAATATCTGACTTGAGTGGTACAACTATGACATTTCCTGATCTGAAGGATTTGAAGAGCTTGGAACGATTGATATTGAGAAATTGCTCAATTACTGGTCCCATTAAAGATTACATTGGTGAAATACAGAACTTAAAGACTCTAGACCTGAGCTTCAACAGGTTGACGGGTTCAATCCCCGATTCGTTTCAGGACTTGAATGCCCTAAATCACATGTTTCTAACTAAAAATTCTCTGAGCGGAACAATTCCGGGGTGGATACTGGACGACAAAAATAATATTGATTTATCTGACAACAATTTTACAGAATCTTCTGCGACTGATTGCCAGCTCTTGGATGTAAACTTGGCTTCCAGCCTCTCATCTTCAGCAAGCAATTCACTCTTTTGTTTCAAGAAGGACCTACCTTGTGCAGGAAAACCACAGTGTGAGTTGAGACTTAATTATTCATTGTTCATAAACTGTGGAGGATCTAAGATGGAGATTGAGGGGAATGAATACGAAGGTGATCTCAACCATGAAGGCATTTCAAACTTTGTTCGCCATGACAAATGGGCTTACAGCAGCACAGGAGTATACATGAATAATGATAATGCTGATCACGTCGCAACAAATACCTTTTCTTTGAATATTAGTGGCCCAGCATACTACCAAACAGCCCGCCTTAGCCCTCTGTCACTTAAATACTATGGCTTTTGTATGCTGAAGGGTAATTATAAAGTGAAGCTTCATTTTGCTGAGATAATGTATTCTAATGACCAGACATTTAGCAGCCTTGGTGTGCGCATATTTGATGTTTCAATTCAAGGTTTTAGATATTTGAGTGATTTTAACATTGCGGAGGAAGCTGGTGGAGTTGGTAAGGGAATCACTAGGGAATTTGATGTTGATGTTAATGATAGCACCTTGGAGATCCATTTATACTGGGTGGGGAAAGGAACTACTGCCATTCCTGACAGAGGTGTATATGGACCTCTTATATCTGCTATCACAGTGACCCCAAACTTCAAAGTTCCTTCAAATGGGTTGTCTGCTGGAGCTATTGTTGGAATCGTGGCTGGATCATGTGTTTTCCTTGCACTGATACTGTTTGTCCTTCAAAAGAAAGGTTTCCTTGGTGGGAAAGATCCACAAGACAAAGAACTTCTCGATCTTAAAACAGGTTATTTTCCTATAAGACAAATTAAAGCTGCTACTGGTAATTTTGACCCTGCAAATAAGATAGGTGAAGGAGGCTTTGGGCCCGTATACAAGGGTGTACTGTCAGATGGTGTTGTGATTGCTGTGAAGCAGCTATCTTCCAAGTCAAAGCAAGGGAACCGTGAATTTGTTAATGAAATAGGAATGATATCTGCTTTGCAGCATCCGAATCTTGTGAAGCTTTATGGGTGTTGTATCGAAGGAAACCAGTTGTTGCTAATATATGAATACATGGAGAACAACAGTCTTGCTCGAGCGCTTTTTGGTCGTGATGAACAAAGGCTACACTTGGACTGGCCCACAAGAATGAAGATTTGTCTGGGGATAGCTAGGGGATTAGCTTATCTTCACGAGGAATCGAGGTTGAAAATAGTACATAGGGATATTAAGGCAACAAATGTCTTACTTGATAAGGATCTAAATGCCAAAATCTCTGACTTTGGTTTGGCAAAACTTGATGAAGAAGAGAATACCCACATCAGCACACGAGTAGCTGGAACAATTGGCTACATGGCTCCTGAATATGCCATGCGGGGTTATTTGACTGACAAAGCAGATGTTTATAGTTTTGGAGTCGTTGCTTTAGAGATTGTTAGTGGAAAGAGTAACACAAATTACAGGCCAAAGGATGAATTTGTTTATCTTCTTGATTGGGCCTATGTTCTCCAAGAGCAAGGAAACCTTCTCGAACTGGTGGATCCAAGTCTTGGTTCAAGCTACTCCAGAGATGAGGCCATGAGAATGCTGAACTTGGCACTCTTATGCACCAACCCATCTCCCACTCTCAGACCATCCATGTCATCTGTAGTGAGCATGCTTGAAGGAAAAGCTCCAATCCAAGCACCAATAATCAAGCGCAGGGATTCAAGCCAGGGCCAGGATGCAAGATTCAAAGCCTTTGAGATGCTATCACTTGACAGCCAAACAATGGTTTCTTCTAAATTCTCTCAAGAAAGTATAGAGCAAAGAGGCAAGTCAACGGATGGACCATGGGCTGACTCCTCAAAATCTTTTTCTAGTAGAGATGATTATTCTTCAACCAGTAAGCTTCTTTGA 3051 0.413 MGFVMSSSKLVSVFFFGFLALNFFTEFGSSAQLIPEDEVKALQAISDKLKNVNWKVTQRSCSGGGGFKNIVTIKDKIVSNVTCNCTFQSRTVCHVTDILLKGQNVSGVIPSEFGNLTRLKQLDLTRNYLNGSIPTIFTRIPIVNLSLLGNRISGSIPAELGDIASLEELILEDNQLGGPLPPNLGNLSNLRRLLLSANNFTGTIPETYGKLKNLTDFRIDGSTLSGKIPSFIGNWTKIDILNMQGTSMEGPIPSTISELKNVTELRISDLSGTTMTFPDLKDLKSLERLILRNCSITGPIKDYIGEIQNLKTLDLSFNRLTGSIPDSFQDLNALNHMFLTKNSLSGTIPGWILDDKNNIDLSDNNFTESSATDCQLLDVNLASSLSSSASNSLFCFKKDLPCAGKPQCELRLNYSLFINCGGSKMEIEGNEYEGDLNHEGISNFVRHDKWAYSSTGVYMNNDNADHVATNTFSLNISGPAYYQTARLSPLSLKYYGFCMLKGNYKVKLHFAEIMYSNDQTFSSLGVRIFDVSIQGFRYLSDFNIAEEAGGVGKGITREFDVDVNDSTLEIHLYWVGKGTTAIPDRGVYGPLISAITVTPNFKVPSNGLSAGAIVGIVAGSCVFLALILFVLQKKGFLGGKDPQDKELLDLKTGYFPIRQIKAATGNFDPANKIGEGGFGPVYKGVLSDGVVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMENNSLARALFGRDEQRLHLDWPTRMKICLGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKDEFVYLLDWAYVLQEQGNLLELVDPSLGSSYSRDEAMRMLNLALLCTNPSPTLRPSMSSVVSMLEGKAPIQAPIIKRRDSSQGQDARFKAFEMLSLDSQTMVSSKFSQESIEQRGKSTDGPWADSSKSFSSRDDYSSTSKLL 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0929 1016 CDD STKc_IRAK 673 940 - -
Glsi14g0929 1016 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 204 271 - -
Glsi14g0929 1016 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 38 203 - -
Glsi14g0929 1016 SUPERFAMILY Protein kinase-like (PK-like) 652 953 IPR011009 -
Glsi14g0929 1016 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 413 600 - -
Glsi14g0929 1016 Gene3D Ribonuclease Inhibitor 264 383 IPR032675 -
Glsi14g0929 1016 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 639 742 - -
Glsi14g0929 1016 Gene3D Ribonuclease Inhibitor 205 263 IPR032675 -
Glsi14g0929 1016 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 278 369 - -
Glsi14g0929 1016 SUPERFAMILY L domain-like 88 367 - -
Glsi14g0929 1016 MobiDBLite consensus disorder prediction 979 1016 - -
Glsi14g0929 1016 Gene3D Transferase(Phosphotransferase) domain 1 743 954 - -
Glsi14g0929 1016 Gene3D Phosphorylase Kinase; domain 1 638 742 - -
Glsi14g0929 1016 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 19 977 - -
Glsi14g0929 1016 FunFam Putative LRR receptor-like serine/threonine-protein kinase 743 950 - -
Glsi14g0929 1016 Gene3D - 412 600 - -
Glsi14g0929 1016 Gene3D Ribonuclease Inhibitor 36 204 IPR032675 -
Glsi14g0929 1016 Pfam Protein tyrosine and serine/threonine kinase 671 937 IPR001245 GO:0004672|GO:0006468
Glsi14g0929 1016 Pfam Malectin domain 415 595 IPR021720 -
Glsi14g0929 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Glsi14g0929 1016 ProSiteProfiles Protein kinase domain profile. 667 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0929 1016 ProSiteProfiles Leucine-rich repeat profile. 309 332 IPR001611 GO:0005515
Glsi14g0929 1016 SMART serkin_6 667 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0929 1016 Pfam Leucine rich repeat 285 344 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0929 Glsi-ChrGlsi14 10711474 10720379 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0929 1 1007 Receptor kinase-like Gene Family AT1G53440 62.377 0.0 1261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi14g0929 PK_Tyr_Ser-Thr 3.4e-50 CL0016