Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0918 ATGAAGATTCAGTGCAGCGTGTGTGAAGCAGCGGAGGCTAAGGTGCTGTGCTGTGCGGACGAGGCGGCGCTGTGTTGGGAATGTGACGAAAAGGTTCATGCAGCTAACAAGCTCGCCAACAAACACCAGAGAGTTCCTCTTTTTACCTCCTCCTCTGATATGCCCAAATGTGATATTTGTCAGGAAATAGTTGGCTTTTTCTTCTGTCTGGAGGACCGGGCTTTACTCTGCAGAAAATGTGATGTGTCCATACACACGGCAAATTCCTATGTCTCCACACATCAGAGATTTCTGCTCACTGGTGTAAGAGTAGGCCTTGAAGCTACTGAGCCTGGTGTTTCCTCTTCTTCTGCTAAGTCACAATCTGAGGAGAAAATGTCAGATACAAAATCTTCTTCTGTCTCTAGAAAGGTTTCCTCAATACCCCAGTCATCTGAATACAATGAGGTGTTACCCATCGAAGTTGGAGGAGTTGGGGAGTTTCCACCAACCAAGGCGTCTTATGGTGGTGGTTCTACATCTGGAAACATTTCACAGTGGCCCATAGAGGAATTTCTTGGGCTAAATGAATTCAGTCAGAACTATAATTATATGGATAATGGACCATCCAAGGCTGACAGTGGTAAGCTTGAGGATTCTGACTCTCCTGGTTTAAGATCTAGTGAAGAGGAAATGGATGACGATGACTGCTTGGGGCGGGTTCCAGATTCATCCTGGAGAGTTCCTCAGATCCCGTCCCCTCCTACAGCTTCAGGGTTATATTGGCCAAAAGACCCTCAATATTCATCTGATAGTGCTCTGTTTTCTCCTGTTCCTAACGTATCCTTTTCTCAAATACAGCAGGTCCACCATGTTCAAAATAATAGTATTTTTTCAAATAGGCGGAGGCAACTTTAA 897 0.4515 MKIQCSVCEAAEAKVLCCADEAALCWECDEKVHAANKLANKHQRVPLFTSSSDMPKCDICQEIVGFFFCLEDRALLCRKCDVSIHTANSYVSTHQRFLLTGVRVGLEATEPGVSSSSAKSQSEEKMSDTKSSSVSRKVSSIPQSSEYNEVLPIEVGGVGEFPPTKASYGGGSTSGNISQWPIEEFLGLNEFSQNYNYMDNGPSKADSGKLEDSDSPGLRSSEEEMDDDDCLGRVPDSSWRVPQIPSPPTASGLYWPKDPQYSSDSALFSPVPNVSFSQIQQVHHVQNNSIFSNRRRQL 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0918 298 MobiDBLite consensus disorder prediction 197 257 - -
Glsi14g0918 298 CDD Bbox1_BBX-like 5 47 - -
Glsi14g0918 298 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 278 - -
Glsi14g0918 298 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Glsi14g0918 298 MobiDBLite consensus disorder prediction 110 141 - -
Glsi14g0918 298 Gene3D Classic Zinc Finger 1 93 - -
Glsi14g0918 298 Pfam B-box zinc finger 53 95 IPR000315 GO:0008270
Glsi14g0918 298 SMART bboxneu5 52 99 IPR000315 GO:0008270
Glsi14g0918 298 SMART bboxneu5 4 47 IPR000315 GO:0008270
Glsi14g0918 298 MobiDBLite consensus disorder prediction 205 220 - -
Glsi14g0918 298 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Glsi14g0918 298 FunFam B-box zinc finger protein 22 1 93 - -
Glsi14g0918 298 CDD Bbox1_BBX-like 56 99 - -
Glsi14g0918 298 SUPERFAMILY B-box zinc-binding domain 45 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0918 Glsi-ChrGlsi14 10627911 10630762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0918 1 296 C2C2-CO-like Transcription Factor Family AT1G78600 47.289 5.39e-90 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi14g0918 zf-B_box 3e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g0918 14 10627911 10630762 Glsi14g0918 14 10627911 10630762 ECH