Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0913 ATGGCTGTGAGTCAATGTGTACCTTATAAAGTTGACACGAGCTGTTCGCTTGCTGCTGAAATTATGGTGGAGCCTGACTTATTGAACCAGAAACAGGGGACGACCCTAGTTTTCCGGACAAAATTATCTCTTGTTTTAAGTACTGAGCGTATGCCTGGGAATAAGTATAACGGTAATTCTAATCATATTCCAGGTCGTCTTGAACGACTTTTGAGAGAAAGAGAGCTAAGAAAAAGCAGCAGGGCTTCTCATTTGAATGAGTCAGCTGATAATAATAATAGGGTTACTGAACCTTTTGAGCATGACCAGCGTTTAAGAGAAGATAATAACTCAGGTGCTTCCCATGTTGAACAATTCCTGGAAGGGGCTGCAAGGGCGCTTAGTGAGGGATGTGAAAGACAAGATGGGAGGTCTTTTAGACAGAGACTTTTGGTGGTGGCTAACAGGCTGCCAGTCTCAGCAGTTAGGAGAGGTGAAGACTCATGGTCTCTGGAGATAAGTGCTGGAGGCCTAGTGAGCGCTCTTTTAGGTGTGAAGGAGTTTGAGGCAAGGTGGATAGGTTGGGCCGGTGTCAATGTGCCTGACGAGATTGGACAGACGGCACTTACTAAAGCTTTGGCTGAAAAGAGGTGTATTCCAGTATTTCTTGATGAAGAGATTGTTCACCAATATTATAATGGCTACTGCAACAACATCTTGTGGCCCCTTTTTCATTACCTTGGACTACCCCAAGAAGATCGCCTTGCTACCACACGAAGTTTCCAGTCTCAGTTTGCAGCATATAAGAAAGCAAATCAAATGTTTGCTGATGTTGTGAACAACCACTATGAAGACGGTGATGTAGTTTGGTGCCATGATTACCATCTTATGTTTCTTCCGCAATGCTTGAAGGAATATAACAGCAAAATGAAAGTTGGCTGGTTTCTTCACACCCCATTTCCATCTTCTGAAATTCATAGGACATTACCATCTCGTTCAGAGCTCCTGCATTCTGTTCTTGCAGCTGATTTAGTTGGTTTTCACACCTATGATTATGCACGCCATTTTGTTAGTGCCTGTACTCGCATTCTTGGACTTGAGGGCACACCTGAAGGGGTTGAGGATCAAGGGAGGCTGACTCGGGTTGCTGCATTTCCCATTGGGATAGACTCAGATCGATTCAGACGTGCACTTGACCTTCCTCAAGTCCAGGATCACATTAAAGAATTACAAGAAAGATTTGAAGGTAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATTCCTCAGAAAATTCTAGCATTTGAAAAATTTTTGGAAGAGAATGCTTATTGGCGTGATAAAGTAGTTTTGCTTCAAATTGCTGTGCCAACAAGAACGGATGTTCCTGAGTATCAAAAGCTTACAAGCCAGGTTCATGAAATTGTTGGTCGCATTAATGGAAGATTTGGAACATTGACTGCTGTTCCTATACATCACCTGGATCGTTCTCTAGACTTTCATGCACTATGTGCTTTGTATGCTGTTACGGATGTAGCACTGGTCACATCTTTGAGGGATGGGATGAATCTTGTCAGTTATGAATTTGTGGCCTGCCAGGAGAAGAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCCGGTGCTGCACAGTCTCTAGGTGCTGGAGCAATTCTGGTTAACCCTTGGAACATCACAGAAGTTGCTACTGCAATTGCCAAGGCTCTGAACATGTCATCAGGGGAAAGAGAGAAGCGACATGACCATAACTATATACATGTAACAAACCACACTGCGCAGGAATGGGCAGAAACTTTTGTGAGCGAACTAAATGATACTGTGGTTGAGGCACAACTAAGGACAAGACAAGTTCCACCCCTGCTTCCGACGAAGACTACAATTGAACGCTATCTGCGATCAACTAATCGATTGCTTATTTTGGGATTCAATGCAACTTTAACCGAACCAGTTGAAAAAAAAGGTGATCAGATTAAAGAAATGGAACTCAAGGTGCATCCAGAATTAAAACAACCTTTGACGGCACTTTGCAGTGACCCAAAGACCACAATTGTTGTGCTTAGTGGAAGTGGTAGAAATGTCTTATATAATAACTTTAGGGAATATGACATGTGGTTGGCAGCAGAAAATGGGATGTTTTTACGCCCTGCAAGGGGAGAATGGATGACAACAATGCCAGAACATCTGAATATGGAATGGTTTGACAGTGTGAAGCATGTTTTTGAGTATTTCACAGAAAGAACACCCCGGTCGCATTTTGATTTTGAAGAAAGGGAAACTTCACTTGTATGGAATTATAAGTACGCAGATGTTGAGTTTGGAAGACTTCAAGCAAGGGACATGTTGCAGCATCTCTGGACAGGTCCAATTTCTAATGCATCCGTTGATGTTGTTCAAGGTAGCCGATCTGTTGAGGTGCGAGCTGTTGGTGTTACAAAGGGAGCAGCTATTGACCGCATCCTGGGTGAGATAGTTCACAGTAAATCCATGACATCACCAATTGATTATGTCCTGTGTATAGGGCATTTTCTTTCGAAGGATGAAGATGTTTATACCTTTTTCGAGCCAGAGCTTCCTTCTGCTGGTGTGGGTGTCCCACGAGCCAAGGTAACAGATGGAGTTAAGTTCCCTGTAGAGAGAAGATCGTCTTTGAAGATCCCAGCTAGTAAAAATGGACCGAAGTCATCATCTCAAAGTAAGGCACAACGGCCCTTGTCAAATTCTGAGAAGAAAACCACGAATCATATCTGTAGTGCACCAAGGCGACCCGCGCCTGAAAAGATCTCATGGAATGTGCTTGACCTCAAGAAGGAGAATTACTTCTCTTGTGCTGTTGGGCGAACTAGAACAAATGCTCGGTATACACTTGGATCTCCAGATGATGTTGTCGCATTTCTGAAGGAACTGGCCCATGCATCTTCTTCTCCAAACTCTTTTTCAAGATCTTAA 2955 0.4311 MAVSQCVPYKVDTSCSLAAEIMVEPDLLNQKQGTTLVFRTKLSLVLSTERMPGNKYNGNSNHIPGRLERLLRERELRKSSRASHLNESADNNNRVTEPFEHDQRLREDNNSGASHVEQFLEGAARALSEGCERQDGRSFRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQTALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNNHYEDGDVVWCHDYHLMFLPQCLKEYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFRRALDLPQVQDHIKELQERFEGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVATAIAKALNMSSGEREKRHDHNYIHVTNHTAQEWAETFVSELNDTVVEAQLRTRQVPPLLPTKTTIERYLRSTNRLLILGFNATLTEPVEKKGDQIKEMELKVHPELKQPLTALCSDPKTTIVVLSGSGRNVLYNNFREYDMWLAAENGMFLRPARGEWMTTMPEHLNMEWFDSVKHVFEYFTERTPRSHFDFEERETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTSPIDYVLCIGHFLSKDEDVYTFFEPELPSAGVGVPRAKVTDGVKFPVERRSSLKIPASKNGPKSSSQSKAQRPLSNSEKKTTNHICSAPRRPAPEKISWNVLDLKKENYFSCAVGRTRTNARYTLGSPDDVVAFLKELAHASSSPNSFSRS 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0913 984 Gene3D Glycogen Phosphorylase B; 389 591 - -
Glsi14g0913 984 CDD HAD_TPP 640 859 - -
Glsi14g0913 984 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 134 973 IPR001830 GO:0003824|GO:0005992
Glsi14g0913 984 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 729 811 - -
Glsi14g0913 984 MobiDBLite consensus disorder prediction 890 916 - -
Glsi14g0913 984 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 134 388 - -
Glsi14g0913 984 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 142 607 IPR012766 GO:0003825|GO:0005992
Glsi14g0913 984 FunFam Alpha,alpha-trehalose-phosphate synthase 663 732 - -
Glsi14g0913 984 MobiDBLite consensus disorder prediction 78 104 - -
Glsi14g0913 984 Gene3D Glycogen Phosphorylase B; 133 388 - -
Glsi14g0913 984 SUPERFAMILY HAD-like 639 972 IPR036412 -
Glsi14g0913 984 CDD GT20_TPS 142 607 IPR001830 GO:0003824|GO:0005992
Glsi14g0913 984 Gene3D - 729 811 - -
Glsi14g0913 984 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 389 591 - -
Glsi14g0913 984 Pfam Trehalose-phosphatase 662 875 IPR003337 GO:0003824|GO:0005992
Glsi14g0913 984 Gene3D - 663 825 IPR023214 -
Glsi14g0913 984 Pfam Glycosyltransferase family 20 142 607 IPR001830 GO:0003824|GO:0005992
Glsi14g0913 984 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 141 610 - -
Glsi14g0913 984 MobiDBLite consensus disorder prediction 883 924 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0913 Glsi-ChrGlsi14 10582490 10594456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0913 51 978 Trehalose Biosynthesis Gene Families AT1G78580 79.101 0.0 1516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g0913 14 10582490 10594456 Glsi14g0913 14 10582490 10594456 ECH