Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0906 ATGAAAGCGCTTCGATGGGGCACTATAAGAAAAAGACAATGTGCTCATGGAGGAGGCCAAAAGCACGATCCTCTGAAGTGGAGGGTTTCTGCTAAACTCCTACCCCGACTTATTCCAGCTCCAGGGTTTCACTCCGTTGAAACCCCCATTTTGGAGCATTTCCGAGCCTTGAATTTTATGGATGTTAAAGAGTTGGACTTCTTCACCGAGTATGGGGATGCAAATAGATACAAGATTCTTGAAGTTATAGGGAAGGGTAGCTATGGTGTAGTTTGTGCAGCAATTGACACACAAACTGGGGAAAAAGTTGCAATAAAAAAGATCCATGATGTTTTTGAGCATATCTCTGATGCCATTAGAATCCTTCGCGAAGTCAAGTTGCTAAGGCTTTTAAGACACCCTGATATTGTTGAGATTAAGCGGATCATGTTGCCACCTTCAAAGAGGGAGTTTAAAGATATTTATGTTGTATTTGAGCTAATGGAGTCTGATCTCCATCATGTCATCAAAGCTAATGATGACTTGACCAGGGAACACCATCAGTTTTTTCTTTATCAGATGCTACGTGCATTGAAGTTTATGCATACAGCAAATGTGTATCACAGAGACCTTAAACCCAAGAATATATTGGCAAATGCAAACTGCAAACTCAAAGTTTGTGATTTTGGACTGGCCAGAGTTGCATTCAATGATGCTCCCATGACAATATTTTGGACAGATTATGTCGCTACAAGATGGTACAGAGCCCCAGAGCTGTGTGGATCATTCTTTTCTAAGTATACACCAGCCATTGATATATGGAGTATTGGATGCATCTTTGCTGAGGTGCTGATAGGAAAGCCATTGTTTCCTGGAAAAAGTGTTGTTCATCAATTAGATTTGATTACTGATCTTCTTGGGACACCACCACCAGAAACTATAACTGGAGTTCGAAATGAGAAAGCAAGGAAATACTTGATGGAAATGCGGAAAAAACCTCCTGTGTCATTTGAACAGAAATTTCCAAATGCTGATCCATTGGCACTTCGCCTATTGCAAAGGCTTTTGGCATTTGATCCTAAGGATCGGCCAACTGCTGAAGAGGCACTAGCTGATCCTTACTTCAAGGGCTTGGCCAAGGTTGAGAGAGAACCTTCCTGTCAGCCAATTTCAAAGTTGGAATTTGAGTTTGAGAGGCGAAGGGTGACAAAGGATGACATTAGGGAGCTAATATATCGGGAAATACTGGAATATCACCCTCAATTGCTTAAAGATTACTTGAATGGAACTGAAAGCACAAACTTCCTCTATCCCAGTGCAATTGGTCAATTCAGAAAGCAATTTGCTTATTGTGAGGAAAATGGTGGTAAAAGCGGCCCAGTGATTCCTCCAGAAAGGAAGCATGTCTCCCTTCCAAGGTCTACTGTTCACTCTAGTATAATTCCTCCTTATACACATTGTGCTGCATATGAGAACAAACAAATCGCAGAAGAAGCATCTAAGAATTTGAGGGCGGCAGAATCAAATTCTGGAAGTCATTTAAGGGGTTCACGACCTCCACCGAGGGTGCCAATAGCTAAACCAGGCAGAGTTGGAGGACCAGTTCTACCCTATGAAATTGGGAGAATCATAAAAAATACCAATGACCCAATAATCTTTAGCCGAAATGCTTCTCCTCAAACCATCTCTCCGCATTGTTCCTTTAGGGCCCTCCCCACAAACCCAGAGAAGACTGTGTCAGAAACACACAAGGATTTGTCACAAAAAAAACACCAACTTCCATCCCATCAGAGTAACTTACCAGCCAGACCATCTATTGACCTCAACACTAACCCGTACTACCAACAAGCGAAGATAGACCACTTAGATGATACTGTCACTACTATTGATGCAAAACTGCTGCAGGCACAATCTCAGTTTGGGGCAGTTGGTGTTGCAGCAGTGGCGGTTGCAGCACACAGGCATTCTGGGGCTGTTCAGTATGGAATGTCATAG 1974 0.4255 MKALRWGTIRKRQCAHGGGQKHDPLKWRVSAKLLPRLIPAPGFHSVETPILEHFRALNFMDVKELDFFTEYGDANRYKILEVIGKGSYGVVCAAIDTQTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHHVIKANDDLTREHHQFFLYQMLRALKFMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFNDAPMTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLIGKPLFPGKSVVHQLDLITDLLGTPPPETITGVRNEKARKYLMEMRKKPPVSFEQKFPNADPLALRLLQRLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHPQLLKDYLNGTESTNFLYPSAIGQFRKQFAYCEENGGKSGPVIPPERKHVSLPRSTVHSSIIPPYTHCAAYENKQIAEEASKNLRAAESNSGSHLRGSRPPPRVPIAKPGRVGGPVLPYEIGRIIKNTNDPIIFSRNASPQTISPHCSFRALPTNPEKTVSETHKDLSQKKHQLPSHQSNLPARPSIDLNTNPYYQQAKIDHLDDTVTTIDAKLLQAQSQFGAVGVAAVAVAAHRHSGAVQYGMS 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0906 657 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 76 412 - -
Glsi14g0906 657 Pfam Protein kinase domain 77 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0906 657 ProSitePatterns Protein kinases ATP-binding region signature. 83 107 IPR017441 GO:0005524
Glsi14g0906 657 SMART serkin_6 77 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0906 657 ProSitePatterns MAP kinase signature. 112 215 IPR003527 GO:0004707|GO:0005524|GO:0006468
Glsi14g0906 657 FunFam Mitogen-activated protein kinase 163 391 - -
Glsi14g0906 657 FunFam Mitogen-activated protein kinase 67 170 - -
Glsi14g0906 657 Gene3D Transferase(Phosphotransferase) domain 1 163 391 - -
Glsi14g0906 657 ProSiteProfiles Protein kinase domain profile. 77 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g0906 657 MobiDBLite consensus disorder prediction 496 523 - -
Glsi14g0906 657 SUPERFAMILY Protein kinase-like (PK-like) 73 372 IPR011009 -
Glsi14g0906 657 Gene3D Phosphorylase Kinase; domain 1 92 414 - -
Glsi14g0906 657 CDD STKc_TDY_MAPK 76 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0906 Glsi-ChrGlsi14 10546743 10552519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0906 62 657 MAP Kinase Gene Family AT1G53510 70.732 0.0 806
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Glsi14g0906 Pkinase 1.3e-64 CL0016